CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra013973
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra013973
T199978_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN
NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra013973.1-P
GRAS
156
515
LVQALVACAEAVHQENLILADALVKRVGPLAASQAGAMGKVATYFAEALARRIYRIRPSSPAVDPSFEEILQMHFYESCPYLKFAHFTANQAILEAVATARGVHVIDLGINQGMQWPALMQALALRPGGSPSFRLTGVGGPSEGDGIQQLGWKLAQLAQAIGVEFEFKGLTVERLTDLEPEMFETRPESETLVVNSVFELHPLLARPGSIEKLLATVKAVKPSVVTVVEQEANHNGVVFLERFNEALHYYSSLFDSLEDGVIIPSQDRVMSEVYLGRQILNVVAAEGTDRIERHETLDQWRKRLGSAGFDPVSLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy