RGL3 (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh2_kg.6__1749__AT5G17490.1 T200130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__1749__AT5G17490.1 GRAS 140 499

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGL3 Arabidopsis thaliana AT5G17490 I 0.947
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I 0.919
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I 0.916
Carubv10003592m.g Capsella rubella Carubv10003592m.g I 0.916
Bra013973 Brassica rapa Bra013973 I 0.891
Bo9g160170 Brassica oleracea Bo9g160170 I 0.888
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.866
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.782
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.777
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.774
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.774
Bo5g149920 Brassica oleracea Bo5g149920 I 0.763
RGL2 Arabidopsis thaliana AT3G03450 D 0.758
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.751