Bostr.19046s0061 (Boechera stricta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Bostr.19046s0061 T202276_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.925 0.925
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19046s0061.1.p GRAS 173 533

Links

Other GRAS family TFs
Other Boechera stricta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGL2 Arabidopsis thaliana AT3G03450 D 0.912
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.911
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.903
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.886
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.876
Bo5g149920 Brassica oleracea Bo5g149920 I 0.875
Bo9g160170 Brassica oleracea Bo9g160170 I 0.793
Bra013973 Brassica rapa Bra013973 I 0.790
RGL3 Arabidopsis thaliana AT5G17490 I 0.785
RGL3 Arabidopsis lyrata fgenesh2_kg.6__1749__AT5G17490.1 I 0.782
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I 0.779
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I 0.774
Carubv10003592m.g Capsella rubella Carubv10003592m.g I 0.774
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.774
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.727
Ca_13295 Cicer arietinum Ca_13295 I 0.719
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.718
Pm014329 Prunus mume Pm014329 I 0.718
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.716
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.715
MDP0000669451 Malus domestica MDP0000669451 I 0.712
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.711
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.709
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.706
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.703
Pm006304 Prunus mume Pm006304 N 0.703
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.700
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.700