Bo5g149920 (Brassica oleracea)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bo5g149920 T199938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.867 0.867
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g149920.1 GRAS 178 540

Links

Other GRAS family TFs
Other Brassica oleracea TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.883
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.875
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.875
RGL2 Arabidopsis thaliana AT3G03450 D 0.860
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.860
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.839
Bo9g160170 Brassica oleracea Bo9g160170 I 0.793
Bra013973 Brassica rapa Bra013973 I 0.790
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I 0.777
RGL3 Arabidopsis thaliana AT5G17490 I 0.765
RGL3 Arabidopsis lyrata fgenesh2_kg.6__1749__AT5G17490.1 I 0.763
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I 0.763
Carubv10003592m.g Capsella rubella Carubv10003592m.g I 0.763
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.763
Pm014329 Prunus mume Pm014329 I 0.707
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.704
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.704
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.701