CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G41240
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA13G41240
T200221_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G41240.2
GRAS
368
741
LRTLLILCAQAVSSSDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGDGTATQIFYMSYKKFTTTDFLRAYQVFISACPFKKFAHFFANKMIMKTADGAETLHIIDFGILYGFQWPILIKFLSRRPGGPPKLRITGIEYPQPGFRPTERIEETGRRLAKYCKRFNVPFEYKAIASRNWETIQIEDLKIERNELLAVNCLVRFKNLLDESIEVNSPRNAVLNLIRKMKPDIFVHSVVNGSYNAPFFLTRFREALFHYSSIYDMFDTLISRENEWRLMLEREFLGREIMNVVACEALERVERPETYKQWQARNTRAGFKQLPLDKEIMTKFRGKLREWYHRDFVFDEDGNWMLQGWKGRILYASTCWV
GLYMA13G41240.3
GRAS
368
581
LRTLLILCAQAVSSSDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGDGTATQIFYMSYKKFTTTDFLRAYQVFISACPFKKFAHFFANKMIMKTADGAETLHIIDFGILYGFQWPILIKFLSRRPGGPPKLRITGIEYPQPGFRPTERIEETGRRLAKYCKRFNVPFEYKAIASRNWETIQIEDLKIERNELLAVNCLGGTVPLF
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28650.m000190
Ricinus communis
28650.m000190
N
0.706
Ca_02625
Cicer arietinum
Ca_02625
N
0.820
Ca_16676
Cicer arietinum
Ca_16676
N
0.730
Ca_16677
Cicer arietinum
Ca_16677
N
0.749
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.721
evm.TU.supercontig_81.123
Carica papaya
evm.TU.supercontig_81.123
N
0.715
GLYMA11G14700
Glycine max
GLYMA11G14700
N
0.715
GLYMA11G14710
Glycine max
GLYMA11G14710
N
0.743
GLYMA11G14720
Glycine max
GLYMA11G14720
N
0.769
GLYMA11G14740
Glycine max
GLYMA11G14740
N
0.711
GLYMA12G06640
Glycine max
GLYMA12G06640
N
0.713
GLYMA12G06655
Glycine max
GLYMA12G06655
N
0.719
GLYMA15G04173
Glycine max
GLYMA15G04173
N
0.965
LjSGA_102069.1
Lotus japonicus
LjSGA_102069.1
N
0.783
MTR_2g097410
Medicago truncatula
MTR_2g097410
N
0.812
MTR_4g064120
Medicago truncatula
MTR_4g064120
N
0.737
MTR_4g064150
Medicago truncatula
MTR_4g064150
N
0.733
MTR_4g064180
Medicago truncatula
MTR_4g064180
N
0.728
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.720
Pm000718
Prunus mume
Pm000718
N
0.702
Pm000719
Prunus mume
Pm000719
N
0.702
Pm027957
Prunus mume
Pm027957
N
0.702
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.705
PRUPE_ppa002797mg
Prunus persica
PRUPE_ppa002797mg
N
0.704
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.703
TCM_041814
Theobroma cacao
TCM_041814
N
0.713