OLONG_013754 (Oryza longistaminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OLONG_013754 T221514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.827 0.772
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.827 0.772
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.823 0.772
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.797 0.807
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.797 0.807
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.797 0.807
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.792 0.789
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.792 0.789
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.792 0.772
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.773 0.649
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.773 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_013754-R1 Homeodomain 58 114

Links

Other Homeodomain family TFs
Other Oryza longistaminata TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013896 Aedes aegypti AAEL013896 I 0.000
AALB009485 Anopheles albimanus AALB009485 I 0.000
AARA004719 Anopheles arabiensis AARA004719 I 0.000
AATE010695 Anopheles atroparvus AATE010695 I 0.000
ACHR000067 Anopheles christyi ACHR000067 I 0.000
ACOM037505 Anopheles coluzzii ACOM037505 I 0.000
ACUA025512 Anopheles culicifacies ACUA025512 I 0.000
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.000
ADAC007516 Anopheles darlingi ADAC007516 I 0.000
ADIR002761 Anopheles dirus ADIR002761 I 0.000
AEPI002385 Anopheles epiroticus AEPI002385 I 0.000
AFAF011208 Anopheles farauti AFAF011208 I 0.000
AFUN009864 Anopheles funestus AFUN009864 I 0.000
AGAP002902 Anopheles gambiae AGAP002902 I 0.000
AMAM019778 Anopheles maculatus AMAM019778 I 0.000
AMEM015931 Anopheles merus AMEM015931 I 0.000
AMIN000723 Anopheles minimus AMIN000723 I 0.000
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.000
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.000
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.000
Bm3575 Brugia malayi Bm3575 I 0.000
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.000
BXY_0211100 Bursaphelenchus xylophilus BXY_0211100 N 0.000
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.000
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.000
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.000
D917_09719 Trichinella nativa D917_09719 I 0.000
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.000
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.000
EFV62078 Trichinella spiralis EFV62078 I 0.000
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.000
Med Drosophila melanogaster FBgn0011655 D 0.000
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.000
GF22974 Drosophila ananassae FBgn0099968 I 0.000
GG11819 Drosophila erecta FBgn0104114 I 0.000
GH18642 Drosophila grimshawi FBgn0126109 I 0.000
GI23400 Drosophila mojavensis FBgn0146126 I 0.000
GL23637 Drosophila persimilis FBgn0161227 I 0.000
GM16436 Drosophila sechellia FBgn0171351 I 0.000
GJ23092 Drosophila virilis FBgn0210194 I 0.000
GK11724 Drosophila willistoni FBgn0213735 I 0.000
GE10952 Drosophila yakuba FBgn0228782 I 0.000
GB50071 Apis mellifera GB50071 I 0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.000
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.000
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.000
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.000
HelroG76435 Helobdella robusta HelroG76435 I 0.000
HelroG88197 Helobdella robusta HelroG88197 I 0.000
HMEL002203 Heliconius melpomene HMEL002203 I 0.000
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.000
ISCW018468 Ixodes scapularis ISCW018468 I 0.000
KGM_12572 Danaus plexippus KGM_12572 I 0.000
L798_13939 Zootermopsis nevadensis L798_13939 I 0.000
L889_g28104 Steinernema feltiae L889_g28104 I 0.000
L892_g27454 Steinernema scapterisci L892_g27454 I 0.000
L893_g344 Steinernema glaseri L893_g344 I 0.000
L893_g8358 Steinernema glaseri L893_g8358 N 0.000
L898_g17086 Steinernema monticolum L898_g17086 I 0.000
LCUP007928 Lucilia cuprina LCUP007928 I 0.000
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.000
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.000
LOAG_08923 Loa loa LOAG_08923 I 0.000
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.000
MCINX014520 Melitaea cinxia MCINX014520 I 0.000
MDOA012885 Musca domestica MDOA012885 I 0.000
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.000
Minc05381 Meloidogyne incognita Minc05381 I 0.000
Minc06628 Meloidogyne incognita Minc06628 I 0.000
Minc15475 Meloidogyne incognita Minc15475 N 0.000
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.000
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.000
NV12984 Nasonia vitripennis NV12984 I 0.000
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.000
PHUM002670 Pediculus humanus PHUM002670 I 0.000
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.000
SINV15516 Solenopsis invicta SINV15516 I 0.000
SMAR013850 Strigamia maritima SMAR013850 I 0.000
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.000
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.000
TC010848 Tribolium castaneum TC010848 I 0.000
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.000
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.000
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.000
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.000
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.000
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.000
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.000