Eucgr.D00596 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.D00596 T228459_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.833 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D00596.1 Homeodomain 27 83
Eucgr.D00596.2 Homeodomain 27 83

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.626
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.000
Bo9g006410 Brassica oleracea Bo9g006410 N 0.000
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.000
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.000
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.000
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.000
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.000
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.000
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.000
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.000
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.626
OB01G35260 Oryza brachyantha OB01G35260 N 0.000
OBART01G26120 Oryza barthii OBART01G26120 N 0.000
OBART05G11630 Oryza barthii OBART05G11630 N 0.000
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.626
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.626
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.626
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.000
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.626
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.626
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.000
OS01G0672201 Oryza sativa OS01G0672201 I 0.626
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.000
Pm012761 Prunus mume Pm012761 N 0.000
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.000
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.000
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.000
TCM_008214 Theobroma cacao TCM_008214 I 0.653