CDC5 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G09770 T266324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00		 Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1		 (Direct) (Direct)
CDC5
M11037_2.00		 Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.870
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G09770.1 Myb 7 53
AT1G09770.1 Myb 59 103

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002321 Aedes aegypti AAEL002321 I
AALB006354 Anopheles albimanus AALB006354 I
AALB006643 Anopheles albimanus AALB006643 I
AARA001110 Anopheles arabiensis AARA001110 I
AARA001115 Anopheles arabiensis AARA001115 I
AATE014626 Anopheles atroparvus AATE014626 I
ACHR008920 Anopheles christyi ACHR008920 I
ACHR009845 Anopheles christyi ACHR009845 I
ACUA016154 Anopheles culicifacies ACUA016154 I
ACUA021227 Anopheles culicifacies ACUA021227 I
ACYPI008177 Acyrthosiphon pisum ACYPI008177 I
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I
ADAC001560 Anopheles darlingi ADAC001560 I
ADAC003449 Anopheles darlingi ADAC003449 I
ADIR000968 Anopheles dirus ADIR000968 I
ADIR000973 Anopheles dirus ADIR000973 I
AEPI005798 Anopheles epiroticus AEPI005798 I
AEPI005803 Anopheles epiroticus AEPI005803 I
AFAF009619 Anopheles farauti AFAF009619 I
AFAF017899 Anopheles farauti AFAF017899 I
Afo_R014630 Aptenodytes forsteri Afo_R014630 I
AFUN011575 Anopheles funestus AFUN011575 I
AGAP000063 Anopheles gambiae AGAP000063 I
AGAP000067 Anopheles gambiae AGAP000067 I
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I
AMEC013051 Anopheles melas AMEC013051 I
AMEC021831 Anopheles melas AMEC021831 I
AMEM002691 Anopheles merus AMEM002691 I
AMIN002127 Anopheles minimus AMIN002127 I
AMIN002132 Anopheles minimus AMIN002132 I
AQUA008308 Anopheles quadriannulatus AQUA008308 I
AQUA008313 Anopheles quadriannulatus AQUA008313 I
ASIS012617 Anopheles sinensis ASIS012617 I
ASIS012967 Anopheles sinensis ASIS012967 I
ASTEI06200 Anopheles stephensi ASTEI06200 I
ASTEI06205 Anopheles stephensi ASTEI06205 I
A_05170 Schistosoma haematobium A_05170 I
BXY_1643500 Bursaphelenchus xylophilus BXY_1643500 I
CBN04513 Caenorhabditis brenneri CBN04513 I
Cflo_00481--XP_394648.3_APIME Camponotus floridanus Cflo_00481--XP_394648.3_APIME I
CGI_10027695 Crassostrea gigas CGI_10027695 I
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I
CPIJ006390 Culex quinquefasciatus CPIJ006390 I
CPIJ006398 Culex quinquefasciatus CPIJ006398 I
CpipJ_CPIJ006390 Culex pipiens CpipJ_CPIJ006390 I
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I
CRE07226 Caenorhabditis remanei CRE07226 I
csin101119 Clonorchis sinensis csin101119 I
csin110224 Clonorchis sinensis csin110224 I
D915_07175 Fasciola hepatica D915_07175 I
D917_00854 Trichinella nativa D917_00854 I
D918_01592 Trichuris suis D918_01592 I
DAPPUDRAFT_249978 Daphnia pulex DAPPUDRAFT_249978 I
DAPPUDRAFT_249991 Daphnia pulex DAPPUDRAFT_249991 I
EFV57892 Trichinella spiralis EFV57892 I
PAX6 Anolis carolinensis ENSACAG00000002252 I
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I
PAX6 Bos taurus ENSBTAG00000004561 I
PAX2 Bos taurus ENSBTAG00000021566 I
PAX2 Canis familiaris ENSCAFG00000009709 I
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I
PAX6 Callithrix jacchus ENSCJAG00000005942 I
PAX2 Callithrix jacchus ENSCJAG00000017397 I
PAX2 Cavia porcellus ENSCPOG00000000939 I
PAX6 Cavia porcellus ENSCPOG00000007245 I
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I
pax6b Danio rerio ENSDARG00000045936 I
pax6a Danio rerio ENSDARG00000103379 I
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I
PAX6 Equus caballus ENSECAG00000021000 I
PAX2 Equus caballus ENSECAG00000021123 I
PAX2 Erinaceus europaeus ENSEEUG00000001995 I
PAX6 Echinops telfairi ENSETEG00000002655 I
PAX6 Felis catus ENSFCAG00000007094 I
PAX2 Felis catus ENSFCAG00000011602 I
PAX6 Homo sapiens ENSG00000007372 D
PAX2 Homo sapiens ENSG00000075891 D
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I
pax6b Gasterosteus aculeatus ENSGACG00000016030 I
PAX6 Gallus gallus ENSGALG00000012123 I
PAX6 Gorilla gorilla ENSGGOG00000010246 I
PAX2 Gorilla gorilla ENSGGOG00000014908 I
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I
PAX2 Loxodonta africana ENSLAFG00000002388 I
PAX6 Loxodonta africana ENSLAFG00000015520 I
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I
ENSMEUG00000015900 Macropus eugenii ENSMEUG00000015900 I
PAX2 Microcebus murinus ENSMICG00000001357 I
PAX6 Microcebus murinus ENSMICG00000004089 I
PAX6 Myotis lucifugus ENSMLUG00000006517 I
PAX2 Macaca mulatta ENSMMUG00000009163 I
PAX6 Macaca mulatta ENSMMUG00000016810 I
PAX6 Monodelphis domestica ENSMODG00000009611 I
PAX2 Monodelphis domestica ENSMODG00000019353 I
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I
Pax2 Mus musculus ENSMUSG00000004231 D
Pax6 Mus musculus ENSMUSG00000027168 D
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I
PAX6 Otolemur garnettii ENSOGAG00000007857 I
PAX2 Otolemur garnettii ENSOGAG00000015274 I
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I
PAX6 Ochotona princeps ENSOPRG00000001678 I
PAX2 Ochotona princeps ENSOPRG00000007096 I
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I
pax6b Oryzias latipes ENSORLG00000009913 I
ENSP00000359319 Macaca fascicularis ENSP00000359319 I
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I
ENSP00000368424 Macaca fascicularis ENSP00000368424 I
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I
PAX6 Procavia capensis ENSPCAG00000005165 I
PAX2 Procavia capensis ENSPCAG00000006623 I
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I
PAX2 Pan troglodytes ENSPTRG00000002853 I
PAX2 Pteropus vampyrus ENSPVAG00000002148 I
Pax6 Rattus norvegicus ENSRNOG00000004410 I
PAX6 Sorex araneus ENSSARG00000011424 I
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I
PAX2 Sus scrofa ENSSSCG00000010556 I
PAX6 Sus scrofa ENSSSCG00000013320 I
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I
PAX6 Tupaia belangeri ENSTBEG00000004748 I
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I
pax6b Takifugu rubripes ENSTRUG00000006935 I
ENSTRUG00000017375 Takifugu rubripes ENSTRUG00000017375 I
ENSTSYG00000011965 Tarsius syrichta ENSTSYG00000011965 I
PAX6 Tursiops truncatus ENSTTRG00000002399 I
PAX2 Tursiops truncatus ENSTTRG00000015106 I
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I
ey Drosophila melanogaster FBgn0005558 D
ey Drosophila pseudoobscura FBgn0018538 I
toy Drosophila melanogaster FBgn0019650 D
ey Drosophila virilis FBgn0028754 I
ey Drosophila persimilis FBgn0043659 I
ey Drosophila sechellia FBgn0068720 I
GF21877 Drosophila ananassae FBgn0098877 I
GF22818 Drosophila ananassae FBgn0099812 I
GG16399 Drosophila erecta FBgn0108631 I
GG16402 Drosophila erecta FBgn0108634 I
GH23963 Drosophila grimshawi FBgn0131420 I
GI14042 Drosophila mojavensis FBgn0136796 I
GI14081 Drosophila mojavensis FBgn0136835 I
GL17563 Drosophila persimilis FBgn0155166 I
GM13021 Drosophila sechellia FBgn0167952 I
GD24416 Drosophila simulans FBgn0195753 I
GJ13300 Drosophila virilis FBgn0200526 I
GK13683 Drosophila willistoni FBgn0215691 I
GK13702 Drosophila willistoni FBgn0215710 I
GE14559 Drosophila yakuba FBgn0232158 I
GE14563 Drosophila yakuba FBgn0232162 I
GA27636 Drosophila pseudoobscura FBgn0249001 I
GB41504 Apis mellifera GB41504 I
GB50342 Apis mellifera GB50342 I
HelroG173449 Helobdella robusta HelroG173449 I
HelroG80374 Helobdella robusta HelroG80374 I
Hsal_09597--XP_394648.3_APIME Harpegnathos saltator Hsal_09597--XP_394648.3_APIME I
ISCW006352 Ixodes scapularis ISCW006352 I
ISCW021772 Ixodes scapularis ISCW021772 I
L596_g12356 Steinernema carpocapsae L596_g12356 I
L798_00712 Zootermopsis nevadensis L798_00712 I
L798_11483 Zootermopsis nevadensis L798_11483 I
L892_g3713 Steinernema scapterisci L892_g3713 I
LLOJ005149 Lutzomyia longipalpis LLOJ005149 I
LotgiG133720 Lottia gigantea LotgiG133720 I
MCINX016249 Melitaea cinxia MCINX016249 I
MCOS_0000220101 Mesocestoides corti MCOS_0000220101 I
MESCA003564 Megaselia scalaris MESCA003564 I
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I
NV15820 Nasonia vitripennis NV15820 I
NV17076 Nasonia vitripennis NV17076 I
Ogr12767 Ophisaurus gracilis Ogr12767 I
PHUM097050 Pediculus humanus PHUM097050 I
PTRK_0000512100 Parastrongyloides trichosuri PTRK_0000512100 I
Pvit_09512 Pogona vitticeps Pvit_09512 I
RSKR_0000862000 Rhabditophanes kr3021 RSKR_0000862000 I
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I
SMAR013763 Strigamia maritima SMAR013763 I
Smp_160670 Schistosoma mansoni Smp_160670 I
Smp_170750 Schistosoma mansoni Smp_170750 I
SMTD_0000837201 Schistosoma mattheei SMTD_0000837201 I
SMU15027897 Schmidtea mediterranea SMU15027897 I
SPAL_0001466800 Strongyloides papillosus SPAL_0001466800 I
SSTP_0001059400 Strongyloides stercoralis SSTP_0001059400 I
SVE_0819200 Strongyloides venezuelensis SVE_0819200 I
T265_09221 Opisthorchis viverrini T265_09221 I
T265_14971 Opisthorchis viverrini T265_14971 I
TC007409 Tribolium castaneum TC007409 I
TC008176 Tribolium castaneum TC008176 I
tetur09g00660 Tetranychus urticae tetur09g00660 I
TMUE_s0038005250 Trichuris muris TMUE_s0038005250 I
TsM_000166900 Taenia solium TsM_000166900 I
TTAC_0000231001 Hydatigera taeniaeformis TTAC_0000231001 I
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I
vab-3 Caenorhabditis elegans WBGene00006870 I
pax6 Xenopus tropicalis XB-GENE-484088 I
pax6.S Xenopus laevis XB-GENE-6464331 I
pax6.L Xenopus laevis XB-GENE-865046 I