OLONG_010266 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_010266 T275922_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.805 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.805 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.805 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.805 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.805 0.804
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.800 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.788 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.788 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.778 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.758 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.758 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.758 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.732 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.732 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_010266-R1 Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27568.m000253 Ricinus communis 27568.m000253 N 0.000
29767.m000200 Ricinus communis 29767.m000200 N 0.000
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.000
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.000
Ca_21138 Cicer arietinum Ca_21138 N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
Cla018179 Citrullus lanatus Cla018179 N 0.000
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.000
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.000
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.000
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N 0.000
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N 0.000
Eucgr.J01244 Eucalyptus grandis Eucgr.J01244 N 0.000
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.000
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.000
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.000
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.000
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.000
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.000
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.000
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.000
mgf011165m Mimulus guttatus mgf011165m N 0.000
mgf014897m Mimulus guttatus mgf014897m N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.000
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.000
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.000
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.000
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
Pm018822 Prunus mume Pm018822 N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.000
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.000
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N 0.000
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
TCM_042705 Theobroma cacao TCM_042705 N 0.000
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.000
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.000
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N 0.000
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.000