CBG01243 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG01243 T301421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.809 0.571
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.809 0.571
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.796 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01243 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01229 Caenorhabditis briggsae CBG01229 N 0.777
CBG01235 Caenorhabditis briggsae CBG01235 I 0.890
CBG01245 Caenorhabditis briggsae CBG01245 N 0.987
CBG01246 Caenorhabditis briggsae CBG01246 N 0.981
CBG01250 Caenorhabditis briggsae CBG01250 D 0.796
CBG06387 Caenorhabditis briggsae CBG06387 I 0.758
CBN15241 Caenorhabditis brenneri CBN15241 I 0.825
CJA19466 Caenorhabditis japonica CJA19466 I 0.777
CRE08751 Caenorhabditis remanei CRE08751 I 0.825
CRE08753 Caenorhabditis remanei CRE08753 I 0.901
CRE08754 Caenorhabditis remanei CRE08754 I 0.830
CRE08755 Caenorhabditis remanei CRE08755 I 0.868
CRE18699 Caenorhabditis remanei CRE18699 I 0.779
CRE19030 Caenorhabditis remanei CRE19030 N 0.751
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.845
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.768
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.770
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.809
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.780
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.819
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.798
nhr-228 Caenorhabditis elegans WBGene00020852 N 0.803