CBG19144 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG19144 T301582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-177
M02419_2.00 		Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Weirauch et al.(2014)
pTH9044 		0.896 0.529
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.805 0.429
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.805 0.429
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19144 Nuclear receptor 20 91

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.000
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.000
MBD10 Arabidopsis thaliana AT1G15340 N 0.000
Bo8g066360 Brassica oleracea Bo8g066360 N 0.000
Bra016665 Brassica rapa Bra016665 N 0.000
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.000
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.000
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.000
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.000
Ca_06682 Cicer arietinum Ca_06682 N 0.000
Ca_19192 Cicer arietinum Ca_19192 N 0.000
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.000
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.000
Cla012920 Citrullus lanatus Cla012920 N 0.000
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.000
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.000
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.000
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.000
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.000
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.000
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.000
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.000
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.000
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.000
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.000
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.000
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.000
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.000
MDP0000152128 Malus domestica MDP0000152128 N 0.000
MDP0000375866 Malus domestica MDP0000375866 N 0.000
MDP0000574053 Malus domestica MDP0000574053 N 0.000
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.000
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.000
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.000
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.000
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.000
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.000
PK04144.1 Cannabis sativa PK04144.1 N 0.000
PK24888.1 Cannabis sativa PK24888.1 N 0.000
Pm027560 Prunus mume Pm027560 N 0.000
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.000
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.000
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.000
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.000
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.000
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.000
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.000
TCM_038107 Theobroma cacao TCM_038107 N 0.000
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.000
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.000
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.000