CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE08760
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE08760
T302110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG01250
M02391_2.00
Caenorhabditis briggsae
WBYGTGTC
GACACRVW
PBM
Weirauch et al.(2014)
pTH6110
0.879
0.714
nhr-84
M02414_2.00
Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN
PBM
Weirauch et al.(2014)
pTH5828
0.852
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE08760
Nuclear receptor
9
80
GPCKVCEQPARGRHFGVMSCRACAAFFRRAGNGNSKYLGRLCEKKDCKIFHDGKYQCKVCRLKKCHDVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01244
Caenorhabditis briggsae
CBG01244
N
0.760
CBG01247
Caenorhabditis briggsae
CBG01247
N
0.800
CBG01248
Caenorhabditis briggsae
CBG01248
I
0.770
CBG01250
Caenorhabditis briggsae
CBG01250
D
0.879
CBG01251
Caenorhabditis briggsae
CBG01251
I
0.879
CBG06387
Caenorhabditis briggsae
CBG06387
I
0.809
CBN01168
Caenorhabditis brenneri
CBN01168
I
0.851
CJA03481
Caenorhabditis japonica
CJA03481
I
0.850
CJA19466
Caenorhabditis japonica
CJA19466
I
0.747
CRE02541
Caenorhabditis remanei
CRE02541
I
0.758
CRE08690
Caenorhabditis remanei
CRE08690
I
0.851
CRE08753
Caenorhabditis remanei
CRE08753
I
0.813
CRE08754
Caenorhabditis remanei
CRE08754
I
0.864
CRE08755
Caenorhabditis remanei
CRE08755
I
0.831
CRE08762
Caenorhabditis remanei
CRE08762
I
0.825
CRE11318
Caenorhabditis remanei
CRE11318
N
0.757
WBGene00003673
Caenorhabditis elegans
WBGene00003673
I
0.801
nhr-84
Caenorhabditis elegans
WBGene00003674
D
0.852
nhr-130
Caenorhabditis elegans
WBGene00003720
I
0.805
nhr-133
Caenorhabditis elegans
WBGene00003723
I
0.833
nhr-230
Caenorhabditis elegans
WBGene00012446
N
0.782
nhr-184
Caenorhabditis elegans
WBGene00018415
I
0.823
nhr-190
Caenorhabditis elegans
WBGene00018622
I
0.790