chr3.CM0711.550.nd (Lotus japonicus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 chr3.CM0711.550.nd T322297_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0711.550.nd SAND 33 125

Links

Other SAND family TFs
Other Lotus japonicus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ULT1 Arabidopsis thaliana AT4G28190 N 0.865
Bo00902s070 Brassica oleracea Bo00902s070 N 0.853
Bo1g051270 Brassica oleracea Bo1g051270 N 0.885
Bo7g111950 Brassica oleracea Bo7g111950 N 0.922
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.923
Bra024219 Brassica rapa Bra024219 N 0.867
Bra026276 Brassica rapa Bra026276 N 0.867
Bra036504 Brassica rapa Bra036504 N 0.850
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.917
Cagra.20132s0010 Capsella grandiflora Cagra.20132s0010 N 0.880
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.904
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.948
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.927
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.963
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.964
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.866
MTR_2g090080 Medicago truncatula MTR_2g090080 N 0.965
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N 0.884
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N 0.876
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.863