Bo9g058970 (Brassica oleracea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bo9g058970 T322452_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g058970.1 SBP 156 230

Links

Other SBP family TFs
Other Brassica oleracea TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004641 Ricinus communis 29929.m004641 I 0.978
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.952
SPL2 Arabidopsis thaliana AT5G43270 N 0.987
SPL3 Oryza indica BGIOSGA007499 N 0.913
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.944
SPL12 Oryza indica BGIOSGA020577 N 0.893
Bo5g051980 Brassica oleracea Bo5g051980 I 0.893
Bo7g065290 Brassica oleracea Bo7g065290 N 0.986
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.983
Bra027478 Brassica rapa Bra027478 N 0.987
Bra030040 Brassica rapa Bra030040 I 0.888
Bra033671 Brassica rapa Bra033671 N 0.987
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.908
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.944
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.987
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.987
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.959
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.964
Ca_11356 Cicer arietinum Ca_11356 I 0.955
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.974
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.946
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.960
F775_31908 Aegilops tauschii F775_31908 N 0.907
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.925
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.957
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.908
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.914
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.914
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.921
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.921
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.922
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.945
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.945
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.939
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.961
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.932
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.928
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.942
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.925
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.963
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.944
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.929
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.940
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.961
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.917
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.944
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.896
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.947
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.943
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.923
MDP0000155354 Malus domestica MDP0000155354 N 0.977
MDP0000249364 Malus domestica MDP0000249364 N 0.907
mgf010397m Mimulus guttatus mgf010397m N 0.955
mgf019346m Mimulus guttatus mgf019346m I 0.970
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.904
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.917
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.942
OB02G12930 Oryza brachyantha OB02G12930 N 0.920
OB02G14840 Oryza brachyantha OB02G14840 N 0.941
OBART02G03260 Oryza barthii OBART02G03260 N 0.913
OBART06G26610 Oryza barthii OBART06G26610 N 0.893
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.944
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.893
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.893
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.913
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.913
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.944
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.893
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.913
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.939
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.893
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.917
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.944
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.891
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.974
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.913
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.944
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.893
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.913
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.944
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.893
OS02G0139400 Oryza sativa OS02G0139400 N 0.913
SPL4 Oryza sativa OS02G0174100 N 0.944
SPL12 Oryza sativa OS06G0703500 N 0.893
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.926
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.926
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.953
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.937
PK16953.1 Cannabis sativa PK16953.1 N 0.978
Pm007020 Prunus mume Pm007020 N 0.977
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.962
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.962
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.912
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.975
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.962
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.912
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.962
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.891
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.921
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.987
Si017749m.g Setaria italica Si017749m.g N 0.923
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.908
TCM_008772 Theobroma cacao TCM_008772 N 0.964
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.987
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.950
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.904
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.904
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.907
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.950
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.904
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.964
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.946