MTR_1g063850 (Medicago truncatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MTR_1g063850 T323878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES60705 Sigma 70 325 395

Links

Other Sigma 70 family TFs
Other Medicago truncatula TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30078.m002307 Ricinus communis 30078.m002307 N 0.746
SIGF Arabidopsis thaliana AT2G36990 N 0.704
Bo4g186560 Brassica oleracea Bo4g186560 N 0.704
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.704
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.704
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.704
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.704
Ca_17153 Cicer arietinum Ca_17153 N 0.845
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.718
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.732
Cla018594 Citrullus lanatus Cla018594 N 0.761
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.718
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.746
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.704
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.704
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.718
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.732
GLYMA05G22730 Glycine max GLYMA05G22730 N 0.704
GLYMA10G06500 Glycine max GLYMA10G06500 N 0.704
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.718
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.718
MTR_7g101840 Medicago truncatula MTR_7g101840 N 0.704
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.746
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.718
Pm030137 Prunus mume Pm030137 N 0.718
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.718
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.718
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.718
TCM_022198 Theobroma cacao TCM_022198 N 0.704
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.704
SIGF Vitis vinifera VIT_08s0040g01560 N 0.732