MTR_7g101840 (Medicago truncatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 MTR_7g101840 T323882_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES81891 Sigma 70 321 391

Links

Other Sigma 70 family TFs
Other Medicago truncatula TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_12052 Cicer arietinum Ca_12052 N 0.958
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.873
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.831
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.831
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.831
Cla018594 Citrullus lanatus Cla018594 N 0.831
Pm030137 Prunus mume Pm030137 N 0.831
30078.m002307 Ricinus communis 30078.m002307 N 0.831
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.831
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.831
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.831
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.831
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.817
TCM_022198 Theobroma cacao TCM_022198 N 0.803
SIGF Vitis vinifera VIT_08s0040g01560 N 0.803
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.803
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.803
SIGF Arabidopsis thaliana AT2G36990 N 0.789
Bo4g186560 Brassica oleracea Bo4g186560 N 0.789
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.789
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.789
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.789
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.789
mgf007606m Mimulus guttatus mgf007606m N 0.789
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.789
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.789
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.789
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.789
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.789
Bra017213 Brassica rapa Bra017213 N 0.775
GLYMA05G22730 Glycine max GLYMA05G22730 N 0.775
GLYMA10G06500 Glycine max GLYMA10G06500 N 0.775
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.775
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.761
GLYMA13G20700 Glycine max GLYMA13G20700 N 0.761
Ca_17153 Cicer arietinum Ca_17153 N 0.718
Aquca_030_00101 Aquilegia coerulea Aquca_030_00101 N 0.718
PDK_20s1626471g002 Phoenix dactylifera PDK_20s1626471g002 N 0.718
MTR_1g063850 Medicago truncatula MTR_1g063850 N 0.704
Aquca_053_00136 Aquilegia coerulea Aquca_053_00136 N 0.704
Gorai.006G165200 Gossypium raimondii Gorai.006G165200 N 0.704