GLYMA05G22730 (Glycine max)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GLYMA05G22730 T323835_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G22730.1 Sigma 70 148 218

Links

Other Sigma 70 family TFs
Other Glycine max TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G06500 Glycine max GLYMA10G06500 N 1.000
GLYMA13G20700 Glycine max GLYMA13G20700 N 0.986
Ca_17153 Cicer arietinum Ca_17153 N 0.817
PGSC0003DMG400021553 Solanum tuberosum PGSC0003DMG400021553 N 0.803
Solyc09g008040.2 Solanum lycopersicum Solyc09g008040.2 N 0.803
SIGF Vitis vinifera VIT_08s0040g01560 N 0.803
Cla018594 Citrullus lanatus Cla018594 N 0.803
cassava35219.m1 Manihot esculenta cassava35219.m1 N 0.803
chr1.CM0033.1120.nc Lotus japonicus chr1.CM0033.1120.nc N 0.803
PRUPE_ppa003513mg Prunus persica PRUPE_ppa003513mg N 0.789
Pm030137 Prunus mume Pm030137 N 0.789
30078.m002307 Ricinus communis 30078.m002307 N 0.789
gene09615-v1.0-hybrid Fragaria vesca gene09615-v1.0-hybrid N 0.789
orange1.1g008352m.g Citrus sinensis orange1.1g008352m.g N 0.789
GLYMA03G33970 Glycine max GLYMA03G33970 N 0.775
GLYMA19G36710 Glycine max GLYMA19G36710 N 0.775
MTR_7g101840 Medicago truncatula MTR_7g101840 N 0.775
Cucsa.124610 Cucumis sativus Cucsa.124610 N 0.775
Ciclev10011376m.g Citrus clementina Ciclev10011376m.g N 0.775
evm.TU.supercontig_56.16 Carica papaya evm.TU.supercontig_56.16 N 0.775
Gorai.009G415400 Gossypium raimondii Gorai.009G415400 N 0.775
TCM_022198 Theobroma cacao TCM_022198 N 0.761
Ca_12052 Cicer arietinum Ca_12052 N 0.761
Eucgr.K01255 Eucalyptus grandis Eucgr.K01255 N 0.761
SapurV1A.0141s0230 Salix purpurea SapurV1A.0141s0230 N 0.761
POPTR_0006s12760 Populus trichocarpa POPTR_0006s12760 N 0.746
mgf007606m Mimulus guttatus mgf007606m N 0.746
AMTR_s00009p00072720 Amborella trichopoda AMTR_s00009p00072720 N 0.732
SIGF Arabidopsis thaliana AT2G36990 N 0.732
Bo4g186560 Brassica oleracea Bo4g186560 N 0.732
Bra017213 Brassica rapa Bra017213 N 0.732
SIGF Arabidopsis lyrata fgenesh2_kg.4__1742__AT2G36990.1 N 0.732
Bostr.23794s0392 Boechera stricta Bostr.23794s0392 N 0.732
Cagra.0558s0014 Capsella grandiflora Cagra.0558s0014 N 0.732
Carubv10022939m.g Capsella rubella Carubv10022939m.g N 0.732
Thhalv10016472m.g Eutrema salsugineum Thhalv10016472m.g N 0.732
MTR_1g063850 Medicago truncatula MTR_1g063850 N 0.704