CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0051340
(
Schistosoma japonicum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sjc_0051340
T334976_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000004837
Sox
8
78
PKGRMNAYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKNLSAKEKKKFKDLAEKDKERYRCEMEHYE
CPRT0000004837
Sox
96
162
PKKGLSAFFLFCNDERPKVKSENPDWKVSEVAKELGRRWEHCKNKAKYESLAQVEKERYEKAMEKYK
Links
Other
Sox
family TFs
Other
Schistosoma japonicum
TFs
183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011380
Aedes aegypti
AAEL011380
N
0.497
AAH44009
Xenopus laevis
AAH44009
N
0.435
AALB006743
Anopheles albimanus
AALB006743
N
0.497
AARA010318
Anopheles arabiensis
AARA010318
N
0.497
AATE010886
Anopheles atroparvus
AATE010886
N
0.477
AATE018776
Anopheles atroparvus
AATE018776
N
0.497
ACEP16613
Atta cephalotes
ACEP16613
N
0.501
ACOC_0000768601
Angiostrongylus costaricensis
ACOC_0000768601
N
0.442
ACUA021022
Anopheles culicifacies
ACUA021022
N
0.497
ACYPI007949
Acyrthosiphon pisum
ACYPI007949
N
0.503
ADAC001494
Anopheles darlingi
ADAC001494
N
0.497
ADIR000367
Anopheles dirus
ADIR000367
N
0.416
ADIR011701
Anopheles dirus
ADIR011701
N
0.497
AEPI002924
Anopheles epiroticus
AEPI002924
N
0.497
AFAF003948
Anopheles farauti
AFAF003948
N
0.497
AFUN010134
Anopheles funestus
AFUN010134
N
0.497
AGAP000005
Anopheles gambiae
AGAP000005
N
0.497
AMAM015540
Anopheles maculatus
AMAM015540
N
0.497
AMEC021909
Anopheles melas
AMEC021909
N
0.497
AMEM017336
Anopheles merus
AMEM017336
N
0.497
AMIN005344
Anopheles minimus
AMIN005344
N
0.497
Aqu1.227714
Amphimedon queenslandica
Aqu1.227714
N
0.419
AQUA004962
Anopheles quadriannulatus
AQUA004962
N
0.497
ASIM_0000048401
Anisakis simplex
ASIM_0000048401
N
0.423
ASIS000124
Anopheles sinensis
ASIS000124
N
0.497
ASIS009950
Anopheles sinensis
ASIS009950
N
0.471
ASU_03902
Ascaris suum
ASU_03902
N
0.423
A_00070
Schistosoma haematobium
A_00070
N
0.700
BGIBMGA001132
Bombyx mori
BGIBMGA001132
N
0.460
Bm4180
Brugia malayi
Bm4180
N
0.423
CapteG158220
Capitella teleta
CapteG158220
N
0.462
Cflo_05895--XP_001121384.1_APIME
Camponotus floridanus
Cflo_05895--XP_001121384.1_APIME
N
0.501
CPIJ014043
Culex quinquefasciatus
CPIJ014043
N
0.480
CpipJ_CPIJ014043
Culex pipiens
CpipJ_CPIJ014043
N
0.480
csin112095
Clonorchis sinensis
csin112095
N
0.597
D915_00818
Fasciola hepatica
D915_00818
N
0.487
D917_01254
Trichinella nativa
D917_01254
N
0.433
D918_07195
Trichuris suis
D918_07195
N
0.424
DAPPUDRAFT_232871
Daphnia pulex
DAPPUDRAFT_232871
N
0.478
DAPPUDRAFT_306496
Daphnia pulex
DAPPUDRAFT_306496
N
0.417
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.433
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.440
ECANG7_07075
Echinococcus canadensis
ECANG7_07075
N
0.454
EEL_0000068601
Elaeophora elaphi
EEL_0000068601
N
0.423
EFV57410
Trichinella spiralis
EFV57410
N
0.433
EmuJ_000941400
Echinococcus multilocularis
EmuJ_000941400
N
0.454
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.459
ENSAMXG00000014832
Astyanax mexicanus
ENSAMXG00000014832
N
0.437
ENSBTAG00000031711
Bos taurus
ENSBTAG00000031711
N
0.445
hmg1/2
Ciona intestinalis
ENSCING00000004075
N
0.493
ENSCJAG00000004401
Callithrix jacchus
ENSCJAG00000004401
N
0.439
ENSCJAG00000007419
Callithrix jacchus
ENSCJAG00000007419
N
0.418
ENSCJAG00000014214
Callithrix jacchus
ENSCJAG00000014214
N
0.445
ENSCJAG00000022832
Callithrix jacchus
ENSCJAG00000022832
N
0.431
ENSCJAG00000033322
Callithrix jacchus
ENSCJAG00000033322
N
0.445
ENSCSAG00000013078
Chlorocebus sabaeus
ENSCSAG00000013078
N
0.445
ENSCSAVG00000000341
Ciona savignyi
ENSCSAVG00000000341
N
0.483
hmgb3b
Danio rerio
ENSDARG00000006408
N
0.444
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.423
hmgb1a
Danio rerio
ENSDARG00000099175
N
0.439
ENSDNOG00000005537
Dasypus novemcinctus
ENSDNOG00000005537
N
0.431
hmgb1b
Gasterosteus aculeatus
ENSGACG00000011447
N
0.444
ENSMPUG00000018359
Mustela putorius furo
ENSMPUG00000018359
N
0.445
ENSOARG00000010383
Ovis aries
ENSOARG00000010383
N
0.422
ENSOARG00000011611
Ovis aries
ENSOARG00000011611
N
0.420
ENSOARG00000015382
Ovis aries
ENSOARG00000015382
N
0.422
ENSOARG00000015955
Ovis aries
ENSOARG00000015955
N
0.422
ENSOCUG00000004133
Oryctolagus cuniculus
ENSOCUG00000004133
N
0.429
ENSOCUG00000021132
Oryctolagus cuniculus
ENSOCUG00000021132
N
0.422
HMGB3
Oryctolagus cuniculus
ENSOCUG00000024959
N
0.445
ENSOGAG00000006589
Otolemur garnettii
ENSOGAG00000006589
N
0.416
hmgb1a
Oryzias latipes
ENSORLG00000003400
N
0.422
ENSPANG00000007527
Papio anubis
ENSPANG00000007527
N
0.422
ENSPANG00000010595
Papio anubis
ENSPANG00000010595
N
0.426
ENSPFOG00000004533
Poecilia formosa
ENSPFOG00000004533
N
0.428
ENSPFOG00000008464
Poecilia formosa
ENSPFOG00000008464
N
0.424
Hmgb2l1
Rattus norvegicus
ENSRNOG00000013167
N
0.428
RGD1561694
Rattus norvegicus
ENSRNOG00000029107
N
0.428
AC127605.1
Rattus norvegicus
ENSRNOG00000033156
N
0.440
Hmgb2
Rattus norvegicus
ENSRNOG00000033321
N
0.428
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
0.437
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
0.442
LOC688583
Rattus norvegicus
ENSRNOG00000050910
N
0.445
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
0.441
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
0.442
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
0.442
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
0.442
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
0.442
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
0.442
HMGB2
Sus scrofa
ENSSSCG00000009704
N
0.434
ENSSSCG00000020770
Sus scrofa
ENSSSCG00000020770
N
0.445
ENSSSCG00000024283
Sus scrofa
ENSSSCG00000024283
N
0.445
hmgb1a
Tetraodon nigroviridis
ENSTNIG00000009909
N
0.420
hmgb1a
Takifugu rubripes
ENSTRUG00000008452
N
0.428
EVEC_0000577301
Enterobius vermicularis
EVEC_0000577301
N
0.423
Dsp1
Drosophila melanogaster
FBgn0011764
N
0.514
GA11488
Drosophila pseudoobscura
FBgn0071539
N
0.514
GF19115
Drosophila ananassae
FBgn0096126
N
0.514
GG17955
Drosophila erecta
FBgn0110175
N
0.514
GH12282
Drosophila grimshawi
FBgn0119761
N
0.514
GI10980
Drosophila mojavensis
FBgn0133743
N
0.514
GD17278
Drosophila simulans
FBgn0188840
N
0.514
GJ19445
Drosophila virilis
FBgn0206588
N
0.514
GK25058
Drosophila willistoni
FBgn0227017
N
0.514
GE17263
Drosophila yakuba
FBgn0234741
N
0.514
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.425
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.440
HCOI00860100
Haemonchus contortus
HCOI00860100
N
0.442
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.441
HelroG157878
Helobdella robusta
HelroG157878
N
0.424
HMEL007340
Heliconius melpomene
HMEL007340
N
0.480
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.441
HmN_000761000
Hymenolepis microstoma
HmN_000761000
N
0.477
HNAJ_0000227501
Hymenolepis nana
HNAJ_0000227501
N
0.458
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.441
Hsal_13110--XP_001121384.1_APIME
Harpegnathos saltator
Hsal_13110--XP_001121384.1_APIME
N
0.501
ISCW017350
Ixodes scapularis
ISCW017350
N
0.470
L596_g22130
Steinernema carpocapsae
L596_g22130
N
0.416
L889_g13533
Steinernema feltiae
L889_g13533
N
0.420
L892_g17551
Steinernema scapterisci
L892_g17551
N
0.420
L893_g5947
Steinernema glaseri
L893_g5947
N
0.420
LCUP007363
Lucilia cuprina
LCUP007363
N
0.514
LDEC006842
Leptinotarsa decemlineata
LDEC006842
N
0.468
LOAG_04936
Loa loa
LOAG_04936
N
0.423
LotgiG200052
Lottia gigantea
LotgiG200052
N
0.421
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.459
MCOS_0000588101
Mesocestoides corti
MCOS_0000588101
N
0.485
MDOA008812
Musca domestica
MDOA008812
N
0.500
Myotis_brandtii_Hmgb2_10018437
Myotis brandtii
Myotis_brandtii_Hmgb2_10018437
N
0.422
Myotis_brandtii_HMGB3_10026974
Myotis brandtii
Myotis_brandtii_HMGB3_10026974
N
0.429
nAv.1.0.1.g02101
Acanthocheilonema viteae
nAv.1.0.1.g02101
N
0.423
NBR_0000911001
Nippostrongylus brasiliensis
NBR_0000911001
N
0.442
nDi.2.2.2.g04979
Dirofilaria immitis
nDi.2.2.2.g04979
N
0.423
NECAME_09126
Necator americanus
NECAME_09126
N
0.442
nRc.2.0.1.g43473
Romanomermis culicivorax
nRc.2.0.1.g43473
N
0.430
NV15664
Nasonia vitripennis
NV15664
N
0.501
PEQ_0000150901
Parascaris equorum
PEQ_0000150901
N
0.423
PHUM006290
Pediculus humanus
PHUM006290
N
0.472
Ppa-hmg-1.2
Pristionchus pacificus
PPA02361
N
0.436
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.432
PXEA_0000637001
Protopolystoma xenopodis
PXEA_0000637001
N
0.447
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.475
RPRC006379
Rhodnius prolixus
RPRC006379
N
0.420
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.528
scaffold580-EXSNAP2012.5
Pristionchus exspectatus
scaffold580-EXSNAP2012.5
N
0.436
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.466
SCUD_0001034301
Schistosoma curassoni
SCUD_0001034301
N
0.700
SINV22586
Solenopsis invicta
SINV22586
N
0.501
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.445
SMAR013695
Strigamia maritima
SMAR013695
N
0.502
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.466
Smp_100090
Schistosoma mansoni
Smp_100090
N
0.693
SMRZ_0000842001
Schistosoma margrebowiei
SMRZ_0000842001
N
0.700
SMTD_0001017101
Schistosoma mattheei
SMTD_0001017101
N
0.700
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.466
SMU15002907
Schmidtea mediterranea
SMU15002907
N
0.501
SMU15013231
Schmidtea mediterranea
SMU15013231
N
0.457
SMU15016767
Schmidtea mediterranea
SMU15016767
N
0.437
SMU15024564
Schmidtea mediterranea
SMU15024564
N
0.423
SMU15027649
Schmidtea mediterranea
SMU15027649
N
0.481
SMUV_0000232601
Syphacia muris
SMUV_0000232601
N
0.426
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.434
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.466
SROB_0000500401
Schistosoma rodhaini
SROB_0000500401
N
0.693
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.433
SSLN_0001302101
Schistocephalus solidus
SSLN_0001302101
N
0.486
T265_10726
Opisthorchis viverrini
T265_10726
N
0.617
T265_12733
Opisthorchis viverrini
T265_12733
N
0.488
TASK_0000795701
Taenia asiatica
TASK_0000795701
N
0.471
TCLT_0000879501
Thelazia callipaeda
TCLT_0000879501
N
0.423
TCNE_0000567001
Toxocara canis
TCNE_0000567001
N
0.423
TELCIR_07111
Teladorsagia circumcincta
TELCIR_07111
N
0.442
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.496
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.496
TRE_0000690301
Trichobilharzia regenti
TRE_0000690301
N
0.644
TsM_000115400
Taenia solium
TsM_000115400
N
0.459
TsM_000746700
Taenia solium
TsM_000746700
N
0.471
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.440
TTAC_0000939701
Hydatigera taeniaeformis
TTAC_0000939701
N
0.430
TTRE_0000338301
Trichuris trichiura
TTRE_0000338301
N
0.428
WBGene00245261
Onchocerca volvulus
WBGene00245261
N
0.423
hmgb2.S
Xenopus laevis
XB-GENE-1000251
N
0.422
YQE_03203
Dendroctonus ponderosae
YQE_03203
N
0.453