SMUV_0000135001 (Syphacia muris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SMUV_0000135001 T336956_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000135001-mRNA-1 Sox 55 122

Links

Other Sox family TFs
Other Syphacia muris TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000973801 Angiostrongylus cantonensis ACAC_0000973801 N 0.502
ANCCAN_09463 Ancylostoma caninum ANCCAN_09463 N 0.502
ANCCEY_15064 Ancylostoma ceylanicum ANCCEY_15064 N 0.502
ANCCEY_15918 Ancylostoma ceylanicum ANCCEY_15918 N 0.502
ANCDUO_06783 Ancylostoma duodenale ANCDUO_06783 N 0.502
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.629
ASU_00939 Ascaris suum ASU_00939 N 0.735
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.511
Bm2393 Brugia malayi Bm2393 N 0.731
Bm7765 Brugia malayi Bm7765 N 0.504
Bm9369 Brugia malayi Bm9369 N 0.504
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.554
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.504
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.473
CBG11867 Caenorhabditis briggsae CBG11867 N 0.598
CBG18873 Caenorhabditis briggsae CBG18873 N 0.421
CBN07735 Caenorhabditis brenneri CBN07735 N 0.598
CBN15844 Caenorhabditis brenneri CBN15844 N 0.517
CBN31697 Caenorhabditis brenneri CBN31697 N 0.598
CJA03316 Caenorhabditis japonica CJA03316 N 0.585
CJA17191 Caenorhabditis japonica CJA17191 N 0.483
CJA30740 Caenorhabditis japonica CJA30740 N 0.585
CPIJ016883 Culex quinquefasciatus CPIJ016883 N 0.429
CpipJ_CPIJ016883 Culex pipiens CpipJ_CPIJ016883 N 0.429
CRE14258 Caenorhabditis remanei CRE14258 N 0.598
CRE28315 Caenorhabditis remanei CRE28315 N 0.475
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.454
D917_05046 Trichinella nativa D917_05046 N 0.521
D917_05048 Trichinella nativa D917_05048 N 0.521
D918_05288 Trichuris suis D918_05288 N 0.586
D918_06015 Trichuris suis D918_06015 N 0.521
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I 0.000
DICVIV_00270 Dictyocaulus viviparus DICVIV_00270 N 0.502
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.441
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.504
EFV56090 Trichinella spiralis EFV56090 N 0.521
EFV56095 Trichinella spiralis EFV56095 N 0.521
ENSCING00000002208 Ciona intestinalis ENSCING00000002208 N 0.420
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N 0.464
ENSCSAVG00000006236 Ciona savignyi ENSCSAVG00000006236 N 0.000
ENSCSAVG00000009396 Ciona savignyi ENSCSAVG00000009396 N 0.424
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.479
GLOTRDRAFT_99857 Gloeophyllum trabeum GLOTRDRAFT_99857 I 0.429
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.618
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.000
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.420
HCOI00076900 Haemonchus contortus HCOI00076900 N 0.502
HCOI01215700 Haemonchus contortus HCOI01215700 N 0.502
HMEL006186 Heliconius melpomene HMEL006186 N 0.432
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.454
ISCW005293 Ixodes scapularis ISCW005293 N 0.477
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.433
L596_g8243 Steinernema carpocapsae L596_g8243 N 0.495
L889_g13125 Steinernema feltiae L889_g13125 N 0.562
L892_g13433 Steinernema scapterisci L892_g13433 I 0.433
L892_g19322 Steinernema scapterisci L892_g19322 N 0.495
L893_g19156 Steinernema glaseri L893_g19156 N 0.495
L898_g14011 Steinernema monticolum L898_g14011 N 0.560
LOAG_11340 Loa loa LOAG_11340 N 0.504
LOAG_15875 Loa loa LOAG_15875 N 0.618
LotgiG176647 Lottia gigantea LotgiG176647 N 0.454
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.433
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.454
mgf006762m Mimulus guttatus mgf006762m N 0.000
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.418
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.543
Minc06622 Meloidogyne incognita Minc06622 N 0.543
MSY001_2636 Malassezia sympodialis MSY001_2636 I 0.417
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.504
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.504
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.731
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.731
NECAME_01599 Necator americanus NECAME_01599 N 0.502
NECAME_06830 Necator americanus NECAME_06830 N 0.436
NEMVEDRAFT_v1g127783 Nematostella vectensis NEMVEDRAFT_v1g127783 N 0.443
nLs.2.1.2.g07200 Litomosoides sigmodontis nLs.2.1.2.g07200 N 0.504
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.731
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.504
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.731
OESDEN_01314 Oesophagostomum dentatum OESDEN_01314 N 0.502
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.504
PaG_04789 Pseudozyma aphidis PaG_04789 I 0.000
PAN0_004d2231 Pseudozyma antarctica PAN0_004d2231 I 0.000
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.454
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.510
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.443
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.000
PSEUBRA_SCAF4g05002 Pseudozyma brasiliensis PSEUBRA_SCAF4g05002 I 0.000
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.563
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.446
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.468
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.529
SMAR009325 Strigamia maritima SMAR009325 N 0.466
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.454
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.563
SPU_025140 Strongylocentrotus purpuratus SPU_025140 N 0.471
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.570
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.594
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.563
SVUK_0000363901 Strongylus vulgaris SVUK_0000363901 N 0.502
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.426
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.716
TCM_014800 Theobroma cacao TCM_014800 N 0.000
TELCIR_16246 Teladorsagia circumcincta TELCIR_16246 N 0.502
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.469
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.586
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.515
UHOR_03854 Ustilago hordei UHOR_03854 I 0.000
UM02364 Ustilago maydis UM02364 I 0.000
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.598
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.504
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.731
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.504