evm.TU.supercontig_70.118 (Carica papaya)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 evm.TU.supercontig_70.118 T344828_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_70.118 TCP 68 180
evm.model.supercontig_70.118 TCP 246 338

Links

Other TCP family TFs
Other Carica papaya TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29693.m002035 Ricinus communis 29693.m002035 N
HMGB5 Arabidopsis lyrata Al_scaffold_0007_498 I
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N
Aquca_007_00897 Aquilegia coerulea Aquca_007_00897 I
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N
AT2G34450 Arabidopsis thaliana AT2G34450 N
HMGB1 Arabidopsis thaliana AT3G51880 I
BGIOSGA004165 Oryza indica BGIOSGA004165 N
BGIOSGA004167 Oryza indica BGIOSGA004167 N
Bo4g182600 Brassica oleracea Bo4g182600 N
Bo8g081200 Brassica oleracea Bo8g081200 I
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I
Bostr.7867s1415 Boechera stricta Bostr.7867s1415 I
Bra021911 Brassica rapa Bra021911 N
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N
Carubv10018109m.g Capsella rubella Carubv10018109m.g I
Carubv10024236m.g Capsella rubella Carubv10024236m.g N
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N
Ca_05162 Cicer arietinum Ca_05162 N
Ca_05164 Cicer arietinum Ca_05164 N
Ca_05351 Cicer arietinum Ca_05351 I
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N
Cucsa.047620 Cucumis sativus Cucsa.047620 N
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N
F775_05073 Aegilops tauschii F775_05073 I
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N
gene18862-v1.0-hybrid Fragaria vesca gene18862-v1.0-hybrid I
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N
GLYMA05G25900 Glycine max GLYMA05G25900 N
GLYMA08G08840 Glycine max GLYMA08G08840 N
GLYMA10G43440 Glycine max GLYMA10G43440 I
GLYMA20G23370 Glycine max GLYMA20G23370 I
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I
GRMZM2G024247 Zea mays GRMZM2G024247 N
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I
LPERR01G21970 Leersia perrieri LPERR01G21970 N
Lus10015268.g Linum usitatissimum Lus10015268.g N
Lus10025391.g Linum usitatissimum Lus10025391.g N
MDP0000143506 Malus domestica MDP0000143506 N
MDP0000170945 Malus domestica MDP0000170945 N
MDP0000392251 Malus domestica MDP0000392251 N
MDP0000695104 Malus domestica MDP0000695104 N
mgf009922m Mimulus guttatus mgf009922m N
MLOC_7069 Hordeum vulgare MLOC_7069 N
MTR_1g115220 Medicago truncatula MTR_1g115220 I
MTR_3g115580 Medicago truncatula MTR_3g115580 I
MTR_4g094622 Medicago truncatula MTR_4g094622 N
MTR_7g068280 Medicago truncatula MTR_7g068280 I
OB01G34910 Oryza brachyantha OB01G34910 I
OBART01G25720 Oryza barthii OBART01G25720 N
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N
OMERI01G23390 Oryza meridionalis OMERI01G23390 N
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N
OS01G0666200 Oryza sativa OS01G0666200 N
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I
Pavir.J05892 Panicum virgatum Pavir.J05892 N
PK22924.1 Cannabis sativa PK22924.1 N
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N
HMG-1 Pisum sativum Q41026_PEA D
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N
Sb03g030540 Sorghum bicolor Sb03g030540 N
SELMODRAFT_117986 Selaginella moellendorffii SELMODRAFT_117986 I
SELMODRAFT_75453 Selaginella moellendorffii SELMODRAFT_75453 I
Si003021m.g Setaria italica Si003021m.g N
TCM_029514 Theobroma cacao TCM_029514 N
TCM_042534 Theobroma cacao TCM_042534 I
Thhalv10010751m.g Eutrema salsugineum Thhalv10010751m.g I
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I
Traes_3DL_21C50DDF5 Triticum aestivum Traes_3DL_21C50DDF5 N