PMAA_024490 (Penicillium marneffei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 PMAA_024490 T392000_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vad-3
M02614_2.00 		Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN		 PBM
Weirauch et al.(2014)
pTH7811 		0.618 0.923
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_024490.t1 Zinc cluster 87 125

Links

Other Zinc cluster family TFs
Other Penicillium marneffei TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g113750 Brassica oleracea Bo5g113750 N 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.000
Bra022434 Brassica rapa Bra022434 N 0.000
Bra038225 Brassica rapa Bra038225 N 0.000
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.000
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.000
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.000
Ca_04659 Cicer arietinum Ca_04659 N 0.000
Ca_04660 Cicer arietinum Ca_04660 N 0.000
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.000
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.000
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.000
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.000
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.000
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.000
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.000
GLYMA02G30990 Glycine max GLYMA02G30990 N 0.000
GLYMA10G10295 Glycine max GLYMA10G10295 N 0.000
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.000
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.000
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.000
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.000
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.000
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.000
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.000
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.000
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.000
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.000
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.000
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.000
MDP0000233925 Malus domestica MDP0000233925 N 0.000
MDP0000278770 Malus domestica MDP0000278770 N 0.000
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.000
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.000
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.000
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.000
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.000
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.000
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.000
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.000
Pm021071 Prunus mume Pm021071 N 0.000
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.000
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.000
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.000
TCM_006323 Theobroma cacao TCM_006323 N 0.000