gw1.21.122.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.21.122.1 T007275_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.833 0.882
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.833 0.882
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.731 0.784
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.21.122.1 AP2 5 56

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I
PK23380.1 Cannabis sativa PK23380.1 I
PK00972.1 Cannabis sativa PK00972.1 I
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
cassava15468.m1 Manihot esculenta cassava15468.m1 I
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I
TCM_042730 Theobroma cacao TCM_042730 I
LBD33 Arabidopsis thaliana AT5G06080 N
Cla004059 Citrullus lanatus Cla004059 N
Bo9g176580 Brassica oleracea Bo9g176580 N
Bra009161 Brassica rapa Bra009161 N
GLYMA02G41710 Glycine max GLYMA02G41710 N
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N
GLYMA14G07260 Glycine max GLYMA14G07260 N
MDP0000133936 Malus domestica MDP0000133936 N
Lus10004707.g Linum usitatissimum Lus10004707.g N
MTR_5g080470 Medicago truncatula MTR_5g080470 N
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N
Carubv10002921m.g Capsella rubella Carubv10002921m.g N
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N
mgf020558m Mimulus guttatus mgf020558m N
LBD33 Vitis vinifera VIT_13s0019g02060 N
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N
Cucsa.165150 Cucumis sativus Cucsa.165150 N
cassava34632.m1 Manihot esculenta cassava34632.m1 N
Ca_16122 Cicer arietinum Ca_16122 N
30143.m001171 Ricinus communis 30143.m001171 N
Pm018835 Prunus mume Pm018835 N