gene01985-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene01985-v1.0-hybrid T008353_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.753 0.898
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.703 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01985.1-v1.0-hybrid AP2 65 116

Links

Other AP2 family TFs
Other Fragaria vesca TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G23930 Arabidopsis thaliana AT5G23930 D
Carubv10000909m.g Capsella rubella Carubv10000909m.g I
Cagra.0086s0019 Capsella grandiflora Cagra.0086s0019 I
Bostr.22157s0164 Boechera stricta Bostr.22157s0164 N
Thhalv10023868m.g Eutrema salsugineum Thhalv10023868m.g N
Thhalv10023457m.g Eutrema salsugineum Thhalv10023457m.g N
Thhalv10023447m.g Eutrema salsugineum Thhalv10023447m.g N
Thhalv10022427m.g Eutrema salsugineum Thhalv10022427m.g N
Carubv10020267m.g Capsella rubella Carubv10020267m.g N
Carubv10020262m.g Capsella rubella Carubv10020262m.g N
Carubv10018684m.g Capsella rubella Carubv10018684m.g N
Cagra.0043s0026 Capsella grandiflora Cagra.0043s0026 N
Cagra.0043s0023 Capsella grandiflora Cagra.0043s0023 N
Cagra.0043s0010 Capsella grandiflora Cagra.0043s0010 N
Bostr.22157s0170 Boechera stricta Bostr.22157s0170 N
Bostr.22157s0168 Boechera stricta Bostr.22157s0168 N
AT1G61960 Arabidopsis thaliana AT1G61960 N
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N
Bostr.22157s0134 Boechera stricta Bostr.22157s0134 N
Bostr.22157s0091 Boechera stricta Bostr.22157s0091 N
Bostr.18473s0264 Boechera stricta Bostr.18473s0264 N
scaffold_200349.1 Arabidopsis lyrata scaffold_200349.1 N
scaffold_200344.1 Arabidopsis lyrata scaffold_200344.1 N
scaffold_200307.1 Arabidopsis lyrata scaffold_200307.1 N
fgenesh2_kg.5__1064__AT3G46950.1 Arabidopsis lyrata fgenesh2_kg.5__1064__AT3G46950.1 N
fgenesh1_pm.C_scaffold_2000223 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000223 N
Bra013207 Brassica rapa Bra013207 N
AT1G62150 Arabidopsis thaliana AT1G62150 N
AT1G62110 Arabidopsis thaliana AT1G62110 N
AT1G62085 Arabidopsis thaliana AT1G62085 N