Gorai.011G291900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.011G291900 T008698_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.731 0.880
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.731 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G291900.1 AP2 50 101

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.000
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
Cla022803 Citrullus lanatus Cla022803 I 0.000
Pm018989 Prunus mume Pm018989 I 0.000
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.000
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.000
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.000
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.000
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.000
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.000
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.000
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.000
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.000
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.000
F775_02345 Aegilops tauschii F775_02345 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.000
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.000
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.000
OB08G30790 Oryza brachyantha OB08G30790 I 0.000
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.000
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.000
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.000
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.000
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.000
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.000
DREB2C Oryza sativa OS08G0565200 I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
Si024059m.g Setaria italica Si024059m.g I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.000