MDP0000880312 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000880312 T009194_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.718 0.792
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.701 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000880312 AP2 70 131

Links

Other AP2 family TFs
Other Malus domestica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D 0.718
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.701
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.678
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.685
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.686
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.706
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.698
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.697
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.687
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.696
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.686
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.715
29729.m002292 Ricinus communis 29729.m002292 I 0.708
29680.m001737 Ricinus communis 29680.m001737 I 0.683
Cla006713 Citrullus lanatus Cla006713 I 0.695
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.708
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.701
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.685
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.701
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.689
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.689
MDP0000153866 Malus domestica MDP0000153866 I 0.796
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.697
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.695
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.692
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.703
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.700
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.703
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.700
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.701
PK07829.1 Cannabis sativa PK07829.1 I 0.683
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.678
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.711
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.689
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.692
F775_05774 Aegilops tauschii F775_05774 I 0.701
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.703
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.679
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.677
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.702
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.717
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.689
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.701
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.687
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.700
OB01G13930 Oryza brachyantha OB01G13930 I 0.689
OBART01G04210 Oryza barthii OBART01G04210 I 0.689
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.689
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.689
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.678
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.689
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.689
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.689
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.689
DREB2A Oryza sativa OS01G0165000 I 0.689
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.681
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.710
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.710
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.737
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.699
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.679
Si002067m.g Setaria italica Si002067m.g I 0.681
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.681
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.701
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.689