CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_18s0089g00910
(
Vitis vinifera
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
VIT_18s0089g00910
T021922_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_18s0089g00910.t01
B3
125
232
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRQVTFCIGENGELRVGVRRL
VIT_18s0089g00910.t01
B3
543
599
LTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMV
Links
Other
B3
family TFs
Other
Vitis vinifera
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10028783m.g
Citrus clementina
Ciclev10028783m.g
I
cassava24574.valid.m1
Manihot esculenta
cassava24574.valid.m1
I
cassava37031.valid.m1
Manihot esculenta
cassava37031.valid.m1
I
cassava37032.valid.m1
Manihot esculenta
cassava37032.valid.m1
I
Cucsa.267130
Cucumis sativus
Cucsa.267130
I
Cucsa.267170
Cucumis sativus
Cucsa.267170
I
e_gw1.229.33.1
Physcomitrella patens
e_gw1.229.33.1
I
estExt_fgenesh1_pg.C_1360017
Physcomitrella patens
estExt_fgenesh1_pg.C_1360017
I
estExt_gwp_gw1.C_2460032
Physcomitrella patens
estExt_gwp_gw1.C_2460032
I
fgenesh1_pg.scaffold_13000185
Physcomitrella patens
fgenesh1_pg.scaffold_13000185
I
fgenesh1_pg.scaffold_31000088
Physcomitrella patens
fgenesh1_pg.scaffold_31000088
I
Aquca_005_00425
Aquilegia coerulea
Aquca_005_00425
I
Ciclev10009354m.g
Citrus clementina
Ciclev10009354m.g
I
AMTR_s00070p00188780
Amborella trichopoda
AMTR_s00070p00188780
I
Eucgr.F03420
Eucalyptus grandis
Eucgr.F03420
I
Eucgr.G01757
Eucalyptus grandis
Eucgr.G01757
I
evm.TU.supercontig_97.78
Carica papaya
evm.TU.supercontig_97.78
I
gene03303-v1.0-hybrid
Fragaria vesca
gene03303-v1.0-hybrid
I
gene24654-v1.0-hybrid
Fragaria vesca
gene24654-v1.0-hybrid
I
Lus10011167.g
Linum usitatissimum
Lus10011167.g
I
Lus10043076.g
Linum usitatissimum
Lus10043076.g
I
MDP0000264803
Malus domestica
MDP0000264803
I
orange1.1g022288m.g
Citrus sinensis
orange1.1g022288m.g
I
orange1.1g026599m.g
Citrus sinensis
orange1.1g026599m.g
I
SapurV1A.0712s0010
Salix purpurea
SapurV1A.0712s0010
I
PK23013.1
Cannabis sativa
PK23013.1
I
Pm029465
Prunus mume
Pm029465
I
Bo3g021940
Brassica oleracea
Bo3g021940
I
GLYMA06G41620
Glycine max
GLYMA06G41620
I
GLYMA12G34300
Glycine max
GLYMA12G34300
I
GLYMA13G36260
Glycine max
GLYMA13G36260
I
MTR_2g082640
Medicago truncatula
MTR_2g082640
I
MTR_4g075480
Medicago truncatula
MTR_4g075480
I
MTR_4g081370
Medicago truncatula
MTR_4g081370
I
POPTR_0001s44230
Populus trichocarpa
POPTR_0001s44230
I
POPTR_0009s13220
Populus trichocarpa
POPTR_0009s13220
I
POPTR_0011s13580
Populus trichocarpa
POPTR_0011s13580
I
PRUPE_ppa009077mg
Prunus persica
PRUPE_ppa009077mg
I
SELMODRAFT_165311
Selaginella moellendorffii
SELMODRAFT_165311
I
SELMODRAFT_165556
Selaginella moellendorffii
SELMODRAFT_165556
I
TCM_030082
Theobroma cacao
TCM_030082
I
TCM_031118
Theobroma cacao
TCM_031118
I
VIT_12s0059g02650
Vitis vinifera
VIT_12s0059g02650
I
PRUPE_ppa010730mg
Prunus persica
PRUPE_ppa010730mg
I
Ca_06956
Cicer arietinum
Ca_06956
I
Ca_16355
Cicer arietinum
Ca_16355
I
Cla001735
Citrullus lanatus
Cla001735
I
28166.m001054
Ricinus communis
28166.m001054
I
GSMUA_Achr4G05310_001
Musa acuminata
GSMUA_Achr4G05310_001
N
PDK_20s1322801g004
Phoenix dactylifera
PDK_20s1322801g004
N
chr3.CM0155.80.nd
Lotus japonicus
chr3.CM0155.80.nd
N
AMTR_s00029p00112130
Amborella trichopoda
AMTR_s00029p00112130
N
AMTR_s00098p00170370
Amborella trichopoda
AMTR_s00098p00170370
N
VIT_00s0532g00050
Vitis vinifera
VIT_00s0532g00050
N
Ciclev10016381m.g
Citrus clementina
Ciclev10016381m.g
N