cassava42790.valid.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava42790.valid.m1 T022293_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava42790.valid.m1 B3 1 72

Links

Other B3 family TFs
Other Manihot esculenta TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.000
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.000
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.000
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.000
Bo6g077600 Brassica oleracea Bo6g077600 I 0.000
Bo9g076410 Brassica oleracea Bo9g076410 I 0.000
Bra003443 Brassica rapa Bra003443 I 0.000
Bra029553 Brassica rapa Bra029553 I 0.000
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.000
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.000
BRADI3G38807 Brachypodium distachyon BRADI3G38807 I 0.000
BRADI3G49987 Brachypodium distachyon BRADI3G49987 I 0.000
BRADI5G16707 Brachypodium distachyon BRADI5G16707 I 0.000
F775_27854 Aegilops tauschii F775_27854 I 0.000
GLYMA06G45460 Glycine max GLYMA06G45460 I 0.000
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.000
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.000
GLYMA12G11600 Glycine max GLYMA12G11600 I 0.000
GLYMA12G32610 Glycine max GLYMA12G32610 I 0.000
GLYMA13G37820 Glycine max GLYMA13G37820 I 0.000
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.000
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.000
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.000
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.000
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.000
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.000
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.000
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.000
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.000
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.000
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.000
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.000
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.000
OB02G32960 Oryza brachyantha OB02G32960 I 0.000
OB04G26860 Oryza brachyantha OB04G26860 I 0.000
OB07G24240 Oryza brachyantha OB07G24240 I 0.000
OBART06G20450 Oryza barthii OBART06G20450 I 0.000
OBART07G18450 Oryza barthii OBART07G18450 I 0.000
OGLUM06G21530 Oryza glumaepatula OGLUM06G21530 I 0.000
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.000
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.000
OMERI06G21070 Oryza meridionalis OMERI06G21070 I 0.000
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.000
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.000
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.000
ONIVA06G24230 Oryza nivara ONIVA06G24230 I 0.000
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.000
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.000
ORGLA06G0168900 Oryza glaberrima ORGLA06G0168900 I 0.000
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.000
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.000
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.000
ORUFI06G21880 Oryza rufipogon ORUFI06G21880 I 0.000
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.000
OS02G0641900 Oryza sativa OS02G0641900 I 0.000
OS07G0558100 Oryza sativa OS07G0558100 I 0.000
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.000
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.000
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.000
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.000
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.000
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.000
AtMYB17 Populus trichocarpa POPTR_0014s07700 I 0.000
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.000
PRUPE_ppa016708mg Prunus persica PRUPE_ppa016708mg I 0.000
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.000
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.000
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.000
Si006790m.g Setaria italica Si006790m.g I 0.000
Si017934m.g Setaria italica Si017934m.g I 0.000
Si030273m.g Setaria italica Si030273m.g I 0.000
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.000
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.000
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.000
TCM_007904 Theobroma cacao TCM_007904 I 0.000
TCM_030009 Theobroma cacao TCM_030009 I 0.000
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.000
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.000
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.000
Traes_6DL_41CBE9959 Triticum aestivum Traes_6DL_41CBE9959 I 0.000
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.000
AtMYB41 Vitis vinifera VIT_12s0134g00570 I 0.000
Ca_14119 Cicer arietinum Ca_14119 I 0.000
Cla001360 Citrullus lanatus Cla001360 I 0.000
Cla014359 Citrullus lanatus Cla014359 I 0.000
Cla021563 Citrullus lanatus Cla021563 I 0.000
Pm009892 Prunus mume Pm009892 I 0.000
Pm015309 Prunus mume Pm015309 I 0.000
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.000
cassava2558.valid.m1 Manihot esculenta cassava2558.valid.m1 I 0.000
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.000
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.000
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.000
mgf018114m Mimulus guttatus mgf018114m I 0.000
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.000
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.000
Cagra.1981s0006 Capsella grandiflora Cagra.1981s0006 I 0.000
Carubv10001366m.g Capsella rubella Carubv10001366m.g I 0.000
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.000
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.000
Eucgr.A01772 Eucalyptus grandis Eucgr.A01772 I 0.000
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.000
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.000
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.000
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.000
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.000
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.000
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.000
gene01992-v1.0-hybrid Fragaria vesca gene01992-v1.0-hybrid I 0.000
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.000
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.000
Gorai.008G151400 Gossypium raimondii Gorai.008G151400 I 0.000
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.000
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.000
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.000
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.000
MDP0000468201 Malus domestica MDP0000468201 I 0.000
MDP0000492221 Malus domestica MDP0000492221 I 0.000
MDP0000710259 Malus domestica MDP0000710259 I 0.000
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.000
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.000
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.000
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.000
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.000
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.000
Pavir.Ga01101 Panicum virgatum Pavir.Ga01101 I 0.000
Pavir.Gb00736 Panicum virgatum Pavir.Gb00736 I 0.000
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.000
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.000
SapurV1A.0024s0060 Salix purpurea SapurV1A.0024s0060 I 0.000
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.000
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.000
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.000
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.000
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.000
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.000
chr3.CM0711.160.nd Lotus japonicus chr3.CM0711.160.nd I 0.000
GRMZM2G123202 Zea mays GRMZM2G123202 N 0.000
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.000
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.000