evm.TU.supercontig_57.71 (Carica papaya)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 evm.TU.supercontig_57.71 T023142_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_57.71 B3 34 139

Links

Other B3 family TFs
Other Carica papaya TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_027113 Theobroma cacao TCM_027113 I 0.000
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.000
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.000
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.000
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.000
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.000
TRAES3BF111600210CFD_g Triticum aestivum TRAES3BF111600210CFD_g N 0.000
TRIUR3_02890 Triticum urartu TRIUR3_02890 N 0.000
Cla001927 Citrullus lanatus Cla001927 N 0.000
29609.m000587 Ricinus communis 29609.m000587 N 0.000
29742.m001397 Ricinus communis 29742.m001397 N 0.000
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.000
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.000
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.000
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.000
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.000
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.000
Si025988m.g Setaria italica Si025988m.g N 0.000
mgf006427m Mimulus guttatus mgf006427m N 0.000
mgf024961m Mimulus guttatus mgf024961m N 0.000
Aquca_100_00036 Aquilegia coerulea Aquca_100_00036 N 0.000
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.000
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.000
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.000
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.000
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.000
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.000
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.000
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.000
ARF1 Arabidopsis thaliana AT1G59750 N 0.000
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.000
Bo1g090350 Brassica oleracea Bo1g090350 N 0.000
Bo4g083590 Brassica oleracea Bo4g083590 N 0.000
Bra035427 Brassica rapa Bra035427 N 0.000
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.000
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.000
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.000
LPERR01G37140 Leersia perrieri LPERR01G37140 N 0.000
MLOC_18401 Hordeum vulgare MLOC_18401 N 0.000
OB01G51580 Oryza brachyantha OB01G51580 N 0.000
OBART12G11990 Oryza barthii OBART12G11990 N 0.000
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.000
OLONG_010675 Oryza longistaminata OLONG_010675 N 0.000
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.000
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.000
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.000
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.000
ORUFI12G13110 Oryza rufipogon ORUFI12G13110 N 0.000
ARF24 Oryza sativa OS12G0479400 N 0.000
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.000
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.000
Sb05g019540 Sorghum bicolor Sb05g019540 N 0.000
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.000