Bo1g112310 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo1g112310 T031086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.844 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g112310.1 bHLH 435 485

Links

Other bHLH family TFs
Other Brassica oleracea TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK18401.1 Cannabis sativa PK18401.1 D 0.844
29711.m000322 Ricinus communis 29711.m000322 I 0.844
Pm026758 Prunus mume Pm026758 I 0.844
29830.m001386 Ricinus communis 29830.m001386 I 0.840
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I 0.844
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I 0.844
Cucsa.043580 Cucumis sativus Cucsa.043580 I 0.844
Cucsa.169240 Cucumis sativus Cucsa.169240 I 0.840
Bostr.19424s0675 Boechera stricta Bostr.19424s0675 I 0.903
Cagra.0316s0082 Capsella grandiflora Cagra.0316s0082 I 0.903
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.844
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.844
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I 0.844
evm.TU.supercontig_6.255 Carica papaya evm.TU.supercontig_6.255 I 0.840
gene14608-v1.0-hybrid Fragaria vesca gene14608-v1.0-hybrid I 0.879
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I 0.844
Lus10028456.g Linum usitatissimum Lus10028456.g I 0.840
Lus10041908.g Linum usitatissimum Lus10041908.g I 0.840
MDP0000275844 Malus domestica MDP0000275844 I 0.840
orange1.1g022288m.g Citrus sinensis orange1.1g022288m.g I 0.844
Pavir.Aa02015 Panicum virgatum Pavir.Aa02015 I 0.863
Pavir.Ab01730 Panicum virgatum Pavir.Ab01730 I 0.839
Thhalv10021271m.g Eutrema salsugineum Thhalv10021271m.g I 0.903
Thhalv10023630m.g Eutrema salsugineum Thhalv10023630m.g I 0.903
POPTR_0005s11550 Populus trichocarpa POPTR_0005s11550 I 0.840
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.840
BHLH121 Arabidopsis thaliana AT3G19860 I 0.903
Bra038236 Brassica rapa Bra038236 I 0.914
BRADI3G11520 Brachypodium distachyon BRADI3G11520 I 0.839
bHLH121 Arabidopsis lyrata fgenesh2_kg.3__2204__AT3G19860.1 I 0.903
GLYMA08G15740 Glycine max GLYMA08G15740 I 0.840
GRMZM2G114444 Zea mays GRMZM2G114444 I 0.863
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I 0.840
LPERR02G12290 Leersia perrieri LPERR02G12290 I 0.863
OB0197G10010 Oryza brachyantha OB0197G10010 I 0.863
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I 0.844
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I 0.840
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I 0.840
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I 0.844
Sb03g028030 Sorghum bicolor Sb03g028030 I 0.863
Si017804m.g Setaria italica Si017804m.g I 0.863
TCM_000204 Theobroma cacao TCM_000204 I 0.840
TCM_006692 Theobroma cacao TCM_006692 I 0.855
bHLH121 Vitis vinifera VIT_03s0038g01790 I 0.840
bHLH11 Vitis vinifera VIT_04s0023g03430 I 0.844
Cla014511 Citrullus lanatus Cla014511 I 0.844
Pm021043 Prunus mume Pm021043 I 0.840