CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPANG00000017265
(
Papio anubis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPANG00000017265
T036545_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB
VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.914
1.000
TCF12
M04137_2.00
Homo sapiens
VCACSTGB
VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.914
1.000
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.914
1.000
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.914
1.000
TCF12
M07806_2.00
Homo sapiens
VCASCTGB
VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.914
1.000
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH
DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.914
1.000
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH
DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.914
1.000
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB
VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.914
1.000
TCF12
M09858_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.914
1.000
TCF12
M09859_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.914
1.000
TCF12
M09860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.914
1.000
TCF12
M09861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.914
1.000
TCF12
M09862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.914
1.000
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN
NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.914
1.000
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN
NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.914
0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB
VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.914
0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB
VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.914
0.885
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN
NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.912
0.962
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN
NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.912
0.962
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN
NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.912
0.962
TCF4
M02728_2.00
Homo sapiens
RCACCTG
CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.912
0.962
TCF4
M04214_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.912
0.962
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB
VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.912
0.962
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.912
0.962
TCF4
M04215_2.00
Homo sapiens
VCACCTGN
NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.912
0.962
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS
SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.886
0.962
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN
NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.886
0.962
Tcf3
M09886_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.886
0.962
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.886
0.923
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.886
0.923
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.886
0.923
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.886
0.923
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.886
0.923
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.886
0.923
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.886
0.923
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPANP00000014080
bHLH
472
525
RRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLE
Links
Other
bHLH
family TFs
Other
Papio anubis
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZAT4
Arabidopsis thaliana
AT2G45120
D
0.000
ZAT9
Arabidopsis thaliana
AT3G60580
D
0.000
ZAT1
Arabidopsis thaliana
AT1G02030
D
0.000
Bostr.13158s0058
Boechera stricta
Bostr.13158s0058
I
0.000
OS02G0659500
Oryza sativa
OS02G0659500
I
0.000
mgf021094m
Mimulus guttatus
mgf021094m
I
0.000
cassava19892.m1
Manihot esculenta
cassava19892.m1
I
0.000
cassava14164.m1
Manihot esculenta
cassava14164.m1
I
0.000
30174.m008818
Ricinus communis
30174.m008818
I
0.000
Ca_23672
Cicer arietinum
Ca_23672
I
0.000
VIT_15s0021g02720
Vitis vinifera
VIT_15s0021g02720
I
0.000
TRIUR3_29692
Triticum urartu
TRIUR3_29692
I
0.000
Solyc03g115450.1
Solanum lycopersicum
Solyc03g115450.1
I
0.000
Solyc01g090840.2
Solanum lycopersicum
Solyc01g090840.2
I
0.000
Si010615m.g
Setaria italica
Si010615m.g
I
0.000
scaffold_503291.1
Arabidopsis lyrata
scaffold_503291.1
I
0.000
POPTR_0002s14460
Populus trichocarpa
POPTR_0002s14460
I
0.000
PGSC0003DMG400026020
Solanum tuberosum
PGSC0003DMG400026020
I
0.000
PGSC0003DMG400024550
Solanum tuberosum
PGSC0003DMG400024550
I
0.000
PGSC0003DMG400020929
Solanum tuberosum
PGSC0003DMG400020929
I
0.000
OS04G0552700
Oryza sativa
OS04G0552700
I
0.000
Thhalv10006508m.g
Eutrema salsugineum
Thhalv10006508m.g
I
0.000
Gorai.001G175400
Gossypium raimondii
Gorai.001G175400
I
0.000
Thhalv10001538m.g
Eutrema salsugineum
Thhalv10001538m.g
I
0.000
SapurV1A.0248s0230
Salix purpurea
SapurV1A.0248s0230
I
0.000
SapurV1A.0033s0440
Salix purpurea
SapurV1A.0033s0440
I
0.000
Pavir.Ab02618
Panicum virgatum
Pavir.Ab02618
I
0.000
orange1.1g044606m.g
Citrus sinensis
orange1.1g044606m.g
I
0.000
Lus10015888.g
Linum usitatissimum
Lus10015888.g
I
0.000
Lus10009278.g
Linum usitatissimum
Lus10009278.g
I
0.000
Gorai.008G106500
Gossypium raimondii
Gorai.008G106500
I
0.000
Gorai.004G164000
Gossypium raimondii
Gorai.004G164000
I
0.000
Bostr.25993s0262
Boechera stricta
Bostr.25993s0262
I
0.000
evm.TU.supercontig_2070.1
Carica papaya
evm.TU.supercontig_2070.1
I
0.000
Eucgr.D02497
Eucalyptus grandis
Eucgr.D02497
I
0.000
Ciclev10020499m.g
Citrus clementina
Ciclev10020499m.g
I
0.000
Carubv10023569m.g
Capsella rubella
Carubv10023569m.g
I
0.000
Carubv10017660m.g
Capsella rubella
Carubv10017660m.g
I
0.000
Cagra.6011s0004
Capsella grandiflora
Cagra.6011s0004
I
0.000
Cagra.0239s0063
Capsella grandiflora
Cagra.0239s0063
I
0.000
Bostr.5325s0123
Boechera stricta
Bostr.5325s0123
I
0.000
Bra007545
Brassica rapa
Bra007545
I
0.000
GSMUA_Achr11G21040_001
Musa acuminata
GSMUA_Achr11G21040_001
I
0.000
GRMZM2G170520
Zea mays
GRMZM2G170520
I
0.000
GLYMA03G03950
Glycine max
GLYMA03G03950
I
0.000
GLYMA01G32981
Glycine max
GLYMA01G32981
I
0.000
GLYMA01G18606
Glycine max
GLYMA01G18606
I
0.000
fgenesh2_kg.4__2705__AT2G45120.1
Arabidopsis lyrata
fgenesh2_kg.4__2705__AT2G45120.1
I
0.000
BRADI3G33100
Brachypodium distachyon
BRADI3G33100
I
0.000
Bra040325
Brassica rapa
Bra040325
I
0.000
Bra014483
Brassica rapa
Bra014483
I
0.000
GSMUA_Achr1G01550_001
Musa acuminata
GSMUA_Achr1G01550_001
I
0.000
Bra003422
Brassica rapa
Bra003422
I
0.000
Bra000372
Brassica rapa
Bra000372
I
0.000
Bo8g095300
Brassica oleracea
Bo8g095300
I
0.000
Bo6g077190
Brassica oleracea
Bo6g077190
I
0.000
Bo4g195370
Brassica oleracea
Bo4g195370
I
0.000
Bo4g104940
Brassica oleracea
Bo4g104940
I
0.000
Bo3g037560
Brassica oleracea
Bo3g037560
I
0.000
BGIOSGA016894
Oryza indica
BGIOSGA016894
I
0.000
BGIOSGA008755
Oryza indica
BGIOSGA008755
I
0.000
OGLUM02G27190
Oryza glumaepatula
OGLUM02G27190
I
0.000
ORUFI02G28150
Oryza rufipogon
ORUFI02G28150
I
0.000
ORGLA04G0180800
Oryza glaberrima
ORGLA04G0180800
I
0.000
ORGLA02G0229600
Oryza glaberrima
ORGLA02G0229600
I
0.000
OPUNC04G18700
Oryza punctata
OPUNC04G18700
I
0.000
ONIVA04G19260
Oryza nivara
ONIVA04G19260
I
0.000
ONIVA02G29150
Oryza nivara
ONIVA02G29150
I
0.000
OMERI04G17450
Oryza meridionalis
OMERI04G17450
I
0.000
OMERI02G26030
Oryza meridionalis
OMERI02G26030
I
0.000
OLONG_016061
Oryza longistaminata
OLONG_016061
I
0.000
ORUFI04G22610
Oryza rufipogon
ORUFI04G22610
I
0.000
OBART04G21020
Oryza barthii
OBART04G21020
I
0.000
OBART02G26700
Oryza barthii
OBART02G26700
I
0.000
OB04G28040
Oryza brachyantha
OB04G28040
I
0.000
MTR_4g027440
Medicago truncatula
MTR_4g027440
I
0.000
MTR_0160s0030
Medicago truncatula
MTR_0160s0030
I
0.000
GSMUA_Achr5G15450_001
Musa acuminata
GSMUA_Achr5G15450_001
I
0.000
GSMUA_Achr4G26920_001
Musa acuminata
GSMUA_Achr4G26920_001
I
0.000
GSMUA_Achr4G12160_001
Musa acuminata
GSMUA_Achr4G12160_001
I
0.000