LotgiG70434 (Lottia gigantea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 LotgiG70434 T040909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.879 0.846
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.879 0.846
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.879 0.846
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.879 0.846
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.855 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP70434 bHLH 10 62

Links

Other bHLH family TFs
Other Lottia gigantea TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF2 Arabidopsis thaliana AT1G45249 D
ABI5 Arabidopsis thaliana AT2G36270 D
ABF4 Arabidopsis thaliana AT3G19290 D
ABF3 Arabidopsis thaliana AT4G34000 D
OS08G0471950 Oryza sativa OS08G0471950 D
PK18009.1 Cannabis sativa PK18009.1 D
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
BGIOSGA005551 Oryza indica BGIOSGA005551 I
BGIOSGA022536 Oryza indica BGIOSGA022536 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
BGIOSGA030899 Oryza indica BGIOSGA030899 I
BGIOSGA040605 Oryza indica BGIOSGA040605 I
Bo1g007700 Brassica oleracea Bo1g007700 I
Bo3g073080 Brassica oleracea Bo3g073080 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bra011485 Brassica rapa Bra011485 I
Bra018800 Brassica rapa Bra018800 I
Bra040260 Brassica rapa Bra040260 I
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I
F775_25077 Aegilops tauschii F775_25077 I
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GRMZM2G002075 Zea mays GRMZM2G002075 I
GRMZM2G033413 Zea mays GRMZM2G033413 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G478417 Zea mays GRMZM2G478417 I
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
LPERR02G27610 Leersia perrieri LPERR02G27610 I
LPERR06G06440 Leersia perrieri LPERR06G06440 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
LPERR09G09170 Leersia perrieri LPERR09G09170 I
MLOC_53321 Hordeum vulgare MLOC_53321 I
MLOC_64571 Hordeum vulgare MLOC_64571 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
MTR_4g085910 Medicago truncatula MTR_4g085910 I
OB02G40680 Oryza brachyantha OB02G40680 I
OB05G25740 Oryza brachyantha OB05G25740 I
OB08G24950 Oryza brachyantha OB08G24950 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART02G33770 Oryza barthii OBART02G33770 I
OBART05G17920 Oryza barthii OBART05G17920 I
OBART06G07070 Oryza barthii OBART06G07070 I
OBART08G17810 Oryza barthii OBART08G17810 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I
OLONG_000475 Oryza longistaminata OLONG_000475 I
OMERI02G32150 Oryza meridionalis OMERI02G32150 I
OMERI06G08210 Oryza meridionalis OMERI06G08210 I
OMERI09G10130 Oryza meridionalis OMERI09G10130 I
ONIVA02G33490 Oryza nivara ONIVA02G33490 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA06G08350 Oryza nivara ONIVA06G08350 I
ONIVA08G19830 Oryza nivara ONIVA08G19830 I
OPUNC06G06690 Oryza punctata OPUNC06G06690 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
OPUNC09G11090 Oryza punctata OPUNC09G11090 I
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I
BZIP23 Oryza sativa OS02G0766700 I
BZIP46 Oryza sativa OS06G0211200 I
OS09G0456200 Oryza sativa OS09G0456200 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I
Sb03g040510 Sorghum bicolor Sb03g040510 I
Sb04g034190 Sorghum bicolor Sb04g034190 I
Sb06g026410 Sorghum bicolor Sb06g026410 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb08g003760 Sorghum bicolor Sb08g003760 I
Sb10g007090 Sorghum bicolor Sb10g007090 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
Si001731m.g Setaria italica Si001731m.g I
Si006889m.g Setaria italica Si006889m.g I
Si013904m.g Setaria italica Si013904m.g I
Si017618m.g Setaria italica Si017618m.g I
Si030114m.g Setaria italica Si030114m.g I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
TCM_007074 Theobroma cacao TCM_007074 I
TCM_022574 Theobroma cacao TCM_022574 I
TCM_033824 Theobroma cacao TCM_033824 I
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
ABF2 Vitis vinifera VIT_18s0001g10450 I
Ca_01548 Cicer arietinum Ca_01548 I
Cla016272 Citrullus lanatus Cla016272 I
Cla022926 Citrullus lanatus Cla022926 I
Pm005288 Prunus mume Pm005288 I
Pm021430 Prunus mume Pm021430 I
30055.m001548 Ricinus communis 30055.m001548 I
30170.m013868 Ricinus communis 30170.m013868 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
Cucsa.219780 Cucumis sativus Cucsa.219780 I
Cucsa.385090 Cucumis sativus Cucsa.385090 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
mgf002047m Mimulus guttatus mgf002047m I
mgf007524m Mimulus guttatus mgf007524m I
mgf014602m Mimulus guttatus mgf014602m I
mgf015092m Mimulus guttatus mgf015092m I
mgf020824m Mimulus guttatus mgf020824m I
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10009399m.g Capsella rubella Carubv10009399m.g I
Carubv10013729m.g Capsella rubella Carubv10013729m.g I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I
Lus10021369.g Linum usitatissimum Lus10021369.g I
MDP0000248567 Malus domestica MDP0000248567 I
MDP0000296303 Malus domestica MDP0000296303 I
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I
Pavir.J31353 Panicum virgatum Pavir.J31353 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
PK02169.1 Cannabis sativa PK02169.1 I
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I
BRADI1G46060 Brachypodium distachyon BRADI1G46060 N
TRIUR3_27679 Triticum urartu TRIUR3_27679 N