CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G40270
(
Glycine max
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GLYMA02G40270
T062891_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846
0.968
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.846
0.935
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832
0.935
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832
0.935
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831
0.903
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831
0.903
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831
0.903
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G40270.1
bZIP
164
225
DPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTENT
Links
Other
bZIP
family TFs
Other
Glycine max
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.11793s0002
Boechera stricta
Bostr.11793s0002
N
0.000
PDK_20s1533271g001
Phoenix dactylifera
PDK_20s1533271g001
N
0.000
Thhalv10010251m.g
Eutrema salsugineum
Thhalv10010251m.g
N
0.000
SapurV1A.0890s0100
Salix purpurea
SapurV1A.0890s0100
N
0.000
orange1.1g009449m.g
Citrus sinensis
orange1.1g009449m.g
N
0.000
Gorai.010G103500
Gossypium raimondii
Gorai.010G103500
N
0.000
gene09028-v1.0-hybrid
Fragaria vesca
gene09028-v1.0-hybrid
N
0.000
Ciclev10007968m.g
Citrus clementina
Ciclev10007968m.g
N
0.000
Carubv10016920m.g
Capsella rubella
Carubv10016920m.g
N
0.000
Cagra.2252s0020
Capsella grandiflora
Cagra.2252s0020
N
0.000
SIGC
Arabidopsis lyrata
Al_scaffold_0005_2291
N
0.000
mgf012819m
Mimulus guttatus
mgf012819m
N
0.000
29794.m003368
Ricinus communis
29794.m003368
N
0.000
Cla022529
Citrullus lanatus
Cla022529
N
0.000
TCM_037242
Theobroma cacao
TCM_037242
N
0.000
Solyc08g065970.2
Solanum lycopersicum
Solyc08g065970.2
N
0.000
PRUPE_ppa003696mg
Prunus persica
PRUPE_ppa003696mg
N
0.000
PGSC0003DMG400025465
Solanum tuberosum
PGSC0003DMG400025465
N
0.000
Bra014857
Brassica rapa
Bra014857
N
0.000
SIGC
Arabidopsis thaliana
AT3G53920
N
0.000