EuGene.0200010492 (Micromonas sp RCC299)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 EuGene.0200010492 T071738_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HY5
M06790_2.00 		Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH		 Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a 		0.829 0.656
HY5
M08407_2.00 		Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN		 ChIP-chip
Mathelier et al.(2014)
MA0551.1 		0.829 0.656
HY5
M09919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HY5_01 		0.829 0.656
Q39895_SOYBN
M10048_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_01 		0.829 0.625
Q39895_SOYBN
M10049_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_02 		0.829 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
56115 bZIP 127 191

Links

Other bZIP family TFs
Other Micromonas sp RCC299 TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HY5 Arabidopsis thaliana AT5G11260 D 0.829
Q39895_SOYBN Glycine max Q39895_SOYBN D 0.829
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I 0.829
Bostr.29827s0269 Boechera stricta Bostr.29827s0269 I 0.791
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I 0.829
SAR_estExt_Genewise1Plus.C_20674 Micromonas pusilla SAR_estExt_Genewise1Plus.C_20674 I 0.850
mgf014305m Mimulus guttatus mgf014305m I 0.840
mgf012104m Mimulus guttatus mgf012104m I 0.817
e_gw1.80.85.1 Physcomitrella patens e_gw1.80.85.1 I 0.812
Cucsa.310450 Cucumis sativus Cucsa.310450 I 0.811
Cucsa.162360 Cucumis sativus Cucsa.162360 I 0.829
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I 0.829
29848.m004650 Ricinus communis 29848.m004650 I 0.829
Cla022656 Citrullus lanatus Cla022656 I 0.829
Cla021273 Citrullus lanatus Cla021273 I 0.791
Ca_21380 Cicer arietinum Ca_21380 I 0.829
HY5 Vitis vinifera VIT_04s0008g05210 I 0.829
TRIUR3_25965 Triticum urartu TRIUR3_25965 I 0.786
Traes_7DL_68B814464 Triticum aestivum Traes_7DL_68B814464 I 0.808
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I 0.829
Traes_6AS_AFF47E71C Triticum aestivum Traes_6AS_AFF47E71C I 0.783
TCM_038392 Theobroma cacao TCM_038392 I 0.841
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I 0.829
Si018524m.g Setaria italica Si018524m.g I 0.820
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I 0.821
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I 0.829
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I 0.817
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I 0.817
PK17235.1 Cannabis sativa PK17235.1 I 0.829
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I 0.829
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I 0.829
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I 0.810
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I 0.831
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I 0.811
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I 0.811
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I 0.811
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I 0.820
SELMODRAFT_440988 Selaginella moellendorffii SELMODRAFT_440988 I 0.835
MDP0000586302 Malus domestica MDP0000586302 I 0.829
MDP0000264514 Malus domestica MDP0000264514 I 0.829
Lus10002900.g Linum usitatissimum Lus10002900.g I 0.829
Lus10002028.g Linum usitatissimum Lus10002028.g I 0.829
Gorai.004G274100 Gossypium raimondii Gorai.004G274100 I 0.841
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I 0.829
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I 0.829
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I 0.829
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I 0.829
Carubv10003520m.g Capsella rubella Carubv10003520m.g I 0.817
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I 0.829
GLYMA18G14750 Glycine max GLYMA18G14750 I 0.829
OB02G17160 Oryza brachyantha OB02G17160 I 0.829
MTR_3g436010 Medicago truncatula MTR_3g436010 I 0.829
LPERR06G16860 Leersia perrieri LPERR06G16860 I 0.808
LPERR02G06800 Leersia perrieri LPERR02G06800 I 0.783
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I 0.810
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I 0.831
GSMUA_Achr6G05280_001 Musa acuminata GSMUA_Achr6G05280_001 I 0.783
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I 0.829
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I 0.829
GRMZM2G140355 Zea mays GRMZM2G140355 I 0.811
GRMZM2G137046 Zea mays GRMZM2G137046 I 0.820
OBART02G07840 Oryza barthii OBART02G07840 I 0.817
GLYMA08G41450 Glycine max GLYMA08G41450 I 0.829
F775_05429 Aegilops tauschii F775_05429 I 0.783
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I 0.829
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I 0.808
Bra023317 Brassica rapa Bra023317 I 0.822
Bra008976 Brassica rapa Bra008976 I 0.822
Bo9g171430 Brassica oleracea Bo9g171430 I 0.822
Bo2g010330 Brassica oleracea Bo2g010330 I 0.822
BGIOSGA023213 Oryza indica BGIOSGA023213 I 0.820
BGIOSGA006916 Oryza indica BGIOSGA006916 I 0.829
BGIOSGA002286 Oryza indica BGIOSGA002286 I 0.801
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I 0.829
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I 0.821
HY5 Arabidopsis lyrata scaffold_601144.1 I 0.829
Sb10g023420 Sorghum bicolor Sb10g023420 I 0.811
Sb04g007060 Sorghum bicolor Sb04g007060 I 0.820
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I 0.829
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I 0.829
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I 0.829
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I 0.829
OS06G0601500 Oryza sativa OS06G0601500 I 0.784
OS02G0203000 Oryza sativa OS02G0203000 I 0.829
ORUFI03G26360 Oryza rufipogon ORUFI03G26360 I 0.817
SELMODRAFT_451326 Selaginella moellendorffii SELMODRAFT_451326 I 0.835
OPUNC06G18440 Oryza punctata OPUNC06G18440 I 0.820
OPUNC02G07060 Oryza punctata OPUNC02G07060 I 0.829
ONIVA02G09400 Oryza nivara ONIVA02G09400 I 0.829
OMERI06G20830 Oryza meridionalis OMERI06G20830 I 0.820
OLONG_023968 Oryza longistaminata OLONG_023968 I 0.783
OLONG_013539 Oryza longistaminata OLONG_013539 I 0.784
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I 0.820
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I 0.829
OBART06G20240 Oryza barthii OBART06G20240 I 0.784
OBART06G20230 Oryza barthii OBART06G20230 I 0.820