Gorai.004G274100 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.004G274100 T071908_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q39895_SOYBN
M10048_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_01 		0.845 0.891
Q39895_SOYBN
M10049_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_02 		0.845 0.891
HY5
M06790_2.00 		Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH		 Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a 		0.845 0.875
HY5
M08407_2.00 		Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN		 ChIP-chip
Mathelier et al.(2014)
MA0551.1 		0.845 0.875
HY5
M09919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HY5_01 		0.845 0.875
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G274100.1 bZIP 86 149

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_038392 Theobroma cacao TCM_038392 I 0.857
HY5 Arabidopsis thaliana AT5G11260 D 0.845
BGIOSGA006916 Oryza indica BGIOSGA006916 I 0.845
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I 0.845
GLYMA08G41450 Glycine max GLYMA08G41450 I 0.845
GLYMA18G14750 Glycine max GLYMA18G14750 I 0.845
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I 0.845
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I 0.845
MTR_3g436010 Medicago truncatula MTR_3g436010 I 0.845
OB02G17160 Oryza brachyantha OB02G17160 I 0.845
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I 0.845
ONIVA02G09400 Oryza nivara ONIVA02G09400 I 0.845
OPUNC02G07060 Oryza punctata OPUNC02G07060 I 0.845
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I 0.845
OS02G0203000 Oryza sativa OS02G0203000 I 0.845
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I 0.845
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I 0.845
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I 0.845
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I 0.845
Q39895_SOYBN Glycine max Q39895_SOYBN D 0.845
HY5 Arabidopsis lyrata scaffold_601144.1 I 0.845
SELMODRAFT_440988 Selaginella moellendorffii SELMODRAFT_440988 I 0.845
SELMODRAFT_451326 Selaginella moellendorffii SELMODRAFT_451326 I 0.845
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I 0.845
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I 0.845
HY5 Vitis vinifera VIT_04s0008g05210 I 0.845
Ca_21380 Cicer arietinum Ca_21380 I 0.845
Cla022656 Citrullus lanatus Cla022656 I 0.845
29848.m004650 Ricinus communis 29848.m004650 I 0.845
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I 0.845
Cucsa.162360 Cucumis sativus Cucsa.162360 I 0.845
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I 0.845
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I 0.845
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I 0.845
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I 0.845
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I 0.845
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I 0.845
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I 0.845
Lus10002900.g Linum usitatissimum Lus10002900.g I 0.845
MDP0000264514 Malus domestica MDP0000264514 I 0.845
MDP0000586302 Malus domestica MDP0000586302 I 0.845
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I 0.845
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I 0.845
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I 0.845
PK17235.1 Cannabis sativa PK17235.1 I 0.845
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I 0.842
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I 0.842
EuGene.0200010492 Micromonas sp RCC299 EuGene.0200010492 I 0.841
Lus10002028.g Linum usitatissimum Lus10002028.g I 0.839
Bo2g010330 Brassica oleracea Bo2g010330 I 0.838
Bo9g171430 Brassica oleracea Bo9g171430 I 0.838
Bra008976 Brassica rapa Bra008976 I 0.838
Bra023317 Brassica rapa Bra023317 I 0.838
mgf014305m Mimulus guttatus mgf014305m I 0.838
GRMZM2G137046 Zea mays GRMZM2G137046 I 0.836
Sb04g007060 Sorghum bicolor Sb04g007060 I 0.836
Si018524m.g Setaria italica Si018524m.g I 0.836
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I 0.836
mgf012104m Mimulus guttatus mgf012104m I 0.833
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I 0.833
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I 0.833
SAR_estExt_Genewise1Plus.C_20674 Micromonas pusilla SAR_estExt_Genewise1Plus.C_20674 I 0.831
Carubv10003520m.g Capsella rubella Carubv10003520m.g I 0.830
GRMZM2G140355 Zea mays GRMZM2G140355 I 0.827
Sb10g023420 Sorghum bicolor Sb10g023420 I 0.827
Cucsa.310450 Cucumis sativus Cucsa.310450 I 0.827
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I 0.827
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I 0.827
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I 0.827
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I 0.826
OBART02G07840 Oryza barthii OBART02G07840 I 0.826
ORUFI03G26360 Oryza rufipogon ORUFI03G26360 I 0.826
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I 0.821
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I 0.821
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I 0.820
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I 0.816
e_gw1.80.85.1 Physcomitrella patens e_gw1.80.85.1 I 0.816
BGIOSGA023213 Oryza indica BGIOSGA023213 I 0.812
OBART06G20230 Oryza barthii OBART06G20230 I 0.812
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I 0.812
OMERI06G20830 Oryza meridionalis OMERI06G20830 I 0.812
OPUNC06G18440 Oryza punctata OPUNC06G18440 I 0.812
Bostr.29827s0269 Boechera stricta Bostr.29827s0269 I 0.807
Traes_7DL_68B814464 Triticum aestivum Traes_7DL_68B814464 I 0.806
Cla021273 Citrullus lanatus Cla021273 I 0.804
F775_05429 Aegilops tauschii F775_05429 I 0.799
GSMUA_Achr6G05280_001 Musa acuminata GSMUA_Achr6G05280_001 I 0.799
LPERR02G06800 Leersia perrieri LPERR02G06800 I 0.799
LPERR06G16860 Leersia perrieri LPERR06G16860 I 0.799
OLONG_023968 Oryza longistaminata OLONG_023968 I 0.799
Traes_6AS_AFF47E71C Triticum aestivum Traes_6AS_AFF47E71C I 0.799
BGIOSGA002286 Oryza indica BGIOSGA002286 I 0.796
Traes_6DS_F8DFD036F Triticum aestivum Traes_6DS_F8DFD036F I 0.784
TRIUR3_25965 Triticum urartu TRIUR3_25965 I 0.784
Ca_22618 Cicer arietinum Ca_22618 I 0.784