Cla021273 (Citrullus lanatus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cla021273 T070049_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HY5
M06790_2.00 		Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH		 Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a 		0.808 0.841
HY5
M08407_2.00 		Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN		 ChIP-chip
Mathelier et al.(2014)
MA0551.1 		0.808 0.841
HY5
M09919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HY5_01 		0.808 0.841
Q39895_SOYBN
M10048_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_01 		0.808 0.794
Q39895_SOYBN
M10049_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_02 		0.808 0.794
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla021273 bZIP 77 139

Links

Other bZIP family TFs
Other Citrullus lanatus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.80.85.1 Physcomitrella patens e_gw1.80.85.1 I 0.840
HY5 Arabidopsis thaliana AT5G11260 D 0.836
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I 0.836
Carubv10003520m.g Capsella rubella Carubv10003520m.g I 0.822
OBART02G07840 Oryza barthii OBART02G07840 I 0.821
ORUFI03G26360 Oryza rufipogon ORUFI03G26360 I 0.821
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I 0.817
Bo2g010330 Brassica oleracea Bo2g010330 I 0.816
Bo9g171430 Brassica oleracea Bo9g171430 I 0.816
Bra008976 Brassica rapa Bra008976 I 0.816
Bra023317 Brassica rapa Bra023317 I 0.816
Lus10002028.g Linum usitatissimum Lus10002028.g I 0.812
BGIOSGA006916 Oryza indica BGIOSGA006916 I 0.808
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I 0.808
GLYMA08G41450 Glycine max GLYMA08G41450 I 0.808
GLYMA18G14750 Glycine max GLYMA18G14750 I 0.808
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I 0.808
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I 0.808
MTR_3g436010 Medicago truncatula MTR_3g436010 I 0.808
OB02G17160 Oryza brachyantha OB02G17160 I 0.808
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I 0.808
ONIVA02G09400 Oryza nivara ONIVA02G09400 I 0.808
OPUNC02G07060 Oryza punctata OPUNC02G07060 I 0.808
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I 0.808
OS02G0203000 Oryza sativa OS02G0203000 I 0.808
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I 0.808
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I 0.808
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I 0.808
Q39895_SOYBN Glycine max Q39895_SOYBN D 0.808
HY5 Arabidopsis lyrata scaffold_601144.1 I 0.808
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I 0.808
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I 0.808
HY5 Vitis vinifera VIT_04s0008g05210 I 0.808
Ca_21380 Cicer arietinum Ca_21380 I 0.808
Cla022656 Citrullus lanatus Cla022656 I 0.808
29848.m004650 Ricinus communis 29848.m004650 I 0.808
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I 0.808
Cucsa.162360 Cucumis sativus Cucsa.162360 I 0.808
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I 0.808
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I 0.808
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I 0.808
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I 0.808
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I 0.808
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I 0.808
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I 0.808
Lus10002900.g Linum usitatissimum Lus10002900.g I 0.808
MDP0000264514 Malus domestica MDP0000264514 I 0.808
MDP0000586302 Malus domestica MDP0000586302 I 0.808
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I 0.808
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I 0.808
PK17235.1 Cannabis sativa PK17235.1 I 0.808
SELMODRAFT_440988 Selaginella moellendorffii SELMODRAFT_440988 I 0.807
SELMODRAFT_451326 Selaginella moellendorffii SELMODRAFT_451326 I 0.807
GRMZM2G140355 Zea mays GRMZM2G140355 I 0.805
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I 0.805
Sb10g023420 Sorghum bicolor Sb10g023420 I 0.805
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I 0.805
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I 0.805
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I 0.805
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I 0.804
TCM_038392 Theobroma cacao TCM_038392 I 0.804
Gorai.004G274100 Gossypium raimondii Gorai.004G274100 I 0.804
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I 0.803
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I 0.803
mgf012104m Mimulus guttatus mgf012104m I 0.801
mgf014305m Mimulus guttatus mgf014305m I 0.801
GRMZM2G137046 Zea mays GRMZM2G137046 I 0.799
Sb04g007060 Sorghum bicolor Sb04g007060 I 0.799
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I 0.799
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I 0.799
Si018524m.g Setaria italica Si018524m.g I 0.799
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I 0.799
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I 0.798
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I 0.798
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I 0.794
EuGene.0200010492 Micromonas sp RCC299 EuGene.0200010492 I 0.791
BGIOSGA002286 Oryza indica BGIOSGA002286 I 0.790
Cucsa.310450 Cucumis sativus Cucsa.310450 I 0.790
Traes_7DL_68B814464 Triticum aestivum Traes_7DL_68B814464 I 0.784
BGIOSGA023213 Oryza indica BGIOSGA023213 I 0.783
OBART06G20230 Oryza barthii OBART06G20230 I 0.783
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I 0.783
OMERI06G20830 Oryza meridionalis OMERI06G20830 I 0.783
OPUNC06G18440 Oryza punctata OPUNC06G18440 I 0.783