Lus10002028.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10002028.g T072003_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HY5
M06790_2.00 		Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH		 Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a 		0.835 0.875
HY5
M08407_2.00 		Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN		 ChIP-chip
Mathelier et al.(2014)
MA0551.1 		0.835 0.875
HY5
M09919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HY5_01 		0.835 0.875
Q39895_SOYBN
M10048_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_01 		0.835 0.859
Q39895_SOYBN
M10049_2.00 		Glycine max Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$STF1_02 		0.835 0.859
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002028 bZIP 87 150

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HY5 Arabidopsis thaliana AT5G11260 D 0.838
Q39895_SOYBN Glycine max Q39895_SOYBN D 0.835
Bostr.29827s0269 Boechera stricta Bostr.29827s0269 I 0.796
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I 0.835
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I 0.835
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I 0.835
SAR_estExt_Genewise1Plus.C_20674 Micromonas pusilla SAR_estExt_Genewise1Plus.C_20674 I 0.818
mgf014305m Mimulus guttatus mgf014305m I 0.827
mgf012104m Mimulus guttatus mgf012104m I 0.822
e_gw1.80.85.1 Physcomitrella patens e_gw1.80.85.1 I 0.827
Cucsa.310450 Cucumis sativus Cucsa.310450 I 0.816
Cucsa.162360 Cucumis sativus Cucsa.162360 I 0.835
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I 0.835
29848.m004650 Ricinus communis 29848.m004650 I 0.835
Cla022656 Citrullus lanatus Cla022656 I 0.835
Cla021273 Citrullus lanatus Cla021273 I 0.812
Ca_21380 Cicer arietinum Ca_21380 I 0.835
HY5 Vitis vinifera VIT_04s0008g05210 I 0.835
Traes_7DL_68B814464 Triticum aestivum Traes_7DL_68B814464 I 0.795
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I 0.835
Traes_6AS_AFF47E71C Triticum aestivum Traes_6AS_AFF47E71C I 0.788
TCM_038392 Theobroma cacao TCM_038392 I 0.839
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I 0.835
Si018524m.g Setaria italica Si018524m.g I 0.825
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I 0.835
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I 0.822
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I 0.822
PK17235.1 Cannabis sativa PK17235.1 I 0.835
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I 0.838
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I 0.835
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I 0.823
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I 0.831
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I 0.823
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I 0.817
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I 0.817
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I 0.825
SELMODRAFT_451326 Selaginella moellendorffii SELMODRAFT_451326 I 0.826
MDP0000586302 Malus domestica MDP0000586302 I 0.835
MDP0000264514 Malus domestica MDP0000264514 I 0.835
Lus10002900.g Linum usitatissimum Lus10002900.g I 0.835
Gorai.004G274100 Gossypium raimondii Gorai.004G274100 I 0.839
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I 0.835
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I 0.835
EuGene.0200010492 Micromonas sp RCC299 EuGene.0200010492 I 0.829
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I 0.835
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I 0.835
Carubv10003520m.g Capsella rubella Carubv10003520m.g I 0.830
GLYMA08G41450 Glycine max GLYMA08G41450 I 0.835
MTR_3g436010 Medicago truncatula MTR_3g436010 I 0.835
LPERR06G16860 Leersia perrieri LPERR06G16860 I 0.795
LPERR02G06800 Leersia perrieri LPERR02G06800 I 0.788
GSMUA_Achr9G28570_001 Musa acuminata GSMUA_Achr9G28570_001 I 0.815
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I 0.831
GSMUA_Achr6G05280_001 Musa acuminata GSMUA_Achr6G05280_001 I 0.788
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I 0.835
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I 0.835
GRMZM2G140355 Zea mays GRMZM2G140355 I 0.817
GRMZM2G137046 Zea mays GRMZM2G137046 I 0.825
GLYMA18G14750 Glycine max GLYMA18G14750 I 0.835
OB02G17160 Oryza brachyantha OB02G17160 I 0.835
F775_05429 Aegilops tauschii F775_05429 I 0.788
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I 0.835
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I 0.806
Bra023317 Brassica rapa Bra023317 I 0.827
Bra008976 Brassica rapa Bra008976 I 0.827
Bo9g171430 Brassica oleracea Bo9g171430 I 0.827
Bo2g010330 Brassica oleracea Bo2g010330 I 0.827
BGIOSGA023213 Oryza indica BGIOSGA023213 I 0.807
BGIOSGA006916 Oryza indica BGIOSGA006916 I 0.835
BGIOSGA002286 Oryza indica BGIOSGA002286 I 0.796
ORUFI03G26360 Oryza rufipogon ORUFI03G26360 I 0.830
SELMODRAFT_440988 Selaginella moellendorffii SELMODRAFT_440988 I 0.826
SELMODRAFT_173274 Selaginella moellendorffii SELMODRAFT_173274 I 0.810
HY5 Arabidopsis lyrata scaffold_601144.1 I 0.835
Sb10g023420 Sorghum bicolor Sb10g023420 I 0.817
Sb04g007060 Sorghum bicolor Sb04g007060 I 0.825
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I 0.835
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I 0.835
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I 0.835
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I 0.842
OS02G0203000 Oryza sativa OS02G0203000 I 0.835
SELMODRAFT_451330 Selaginella moellendorffii SELMODRAFT_451330 I 0.810
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I 0.835
OPUNC06G18440 Oryza punctata OPUNC06G18440 I 0.807
OPUNC02G07060 Oryza punctata OPUNC02G07060 I 0.835
ONIVA02G09400 Oryza nivara ONIVA02G09400 I 0.835
OMERI06G20830 Oryza meridionalis OMERI06G20830 I 0.807
OLONG_023968 Oryza longistaminata OLONG_023968 I 0.788
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I 0.807
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I 0.835
OBART06G20230 Oryza barthii OBART06G20230 I 0.807
OBART02G07840 Oryza barthii OBART02G07840 I 0.830