CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr1.LjT35C22.100.nc
(
Lotus japonicus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
chr1.LjT35C22.100.nc
T073218_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.LjT35C22.100.nc
bZIP
130
192
QDVKRLRRKVSNRESARRSRRRKQAHLAELETQVEKLKLENATLYKQFTDASQQFREADTNNR
Links
Other
bZIP
family TFs
Other
Lotus japonicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RKD2
Arabidopsis thaliana
AT1G74480
D
0.000
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
0.000
RKD1
Arabidopsis thaliana
AT1G18790
I
0.000
BGIOSGA005630
Oryza indica
BGIOSGA005630
I
0.000
Bo7g064180
Brassica oleracea
Bo7g064180
I
0.000
Bra008153
Brassica rapa
Bra008153
I
0.000
Bra012122
Brassica rapa
Bra012122
I
0.000
Bra015907
Brassica rapa
Bra015907
I
0.000
F775_00225
Aegilops tauschii
F775_00225
I
0.000
F775_07483
Aegilops tauschii
F775_07483
I
0.000
fgenesh1_pg.C_scaffold_2000886
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000886
I
0.000
fgenesh1_pg.C_scaffold_2001738
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001738
I
0.000
fgenesh1_pg.C_scaffold_8002648
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002648
I
0.000
fgenesh2_kg.1__2057__AT1G18790.1
Arabidopsis lyrata
fgenesh2_kg.1__2057__AT1G18790.1
I
0.000
GLYMA04G33516
Glycine max
GLYMA04G33516
I
0.000
GLYMA05G01030
Glycine max
GLYMA05G01030
I
0.000
GLYMA06G20881
Glycine max
GLYMA06G20881
I
0.000
GLYMA17G10866
Glycine max
GLYMA17G10866
I
0.000
GRMZM2G392306
Zea mays
GRMZM2G392306
I
0.000
LPERR06G07570
Leersia perrieri
LPERR06G07570
I
0.000
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.000
MLOC_59560
Hordeum vulgare
MLOC_59560
I
0.000
MTR_3g435550
Medicago truncatula
MTR_3g435550
I
0.000
OB02G39310
Oryza brachyantha
OB02G39310
I
0.000
OB06G17750
Oryza brachyantha
OB06G17750
I
0.000
OBART02G32320
Oryza barthii
OBART02G32320
I
0.000
OGLUM02G32960
Oryza glumaepatula
OGLUM02G32960
I
0.000
OLONG_016325
Oryza longistaminata
OLONG_016325
I
0.000
OMERI02G30990
Oryza meridionalis
OMERI02G30990
I
0.000
OMERI06G09770
Oryza meridionalis
OMERI06G09770
I
0.000
ONIVA06G04700
Oryza nivara
ONIVA06G04700
I
0.000
ONIVA06G09450
Oryza nivara
ONIVA06G09450
I
0.000
OPUNC02G29870
Oryza punctata
OPUNC02G29870
I
0.000
OPUNC06G07940
Oryza punctata
OPUNC06G07940
I
0.000
ORGLA02G0278600
Oryza glaberrima
ORGLA02G0278600
I
0.000
ORGLA06G0077700
Oryza glaberrima
ORGLA06G0077700
I
0.000
ORUFI02G34010
Oryza rufipogon
ORUFI02G34010
I
0.000
ORUFI06G08510
Oryza rufipogon
ORUFI06G08510
I
0.000
OS06G0228950
Oryza sativa
OS06G0228950
I
0.000
PRUPE_ppa023107mg
Prunus persica
PRUPE_ppa023107mg
I
0.000
Sb10g008120
Sorghum bicolor
Sb10g008120
I
0.000
scaffold_103100001.1
Arabidopsis lyrata
scaffold_103100001.1
I
0.000
Si008273m.g
Setaria italica
Si008273m.g
I
0.000
Si020172m.g
Setaria italica
Si020172m.g
I
0.000
TCM_014009
Theobroma cacao
TCM_014009
I
0.000
Traes_6BL_301505440
Triticum aestivum
Traes_6BL_301505440
I
0.000
Traes_6DL_8ECBBC867
Triticum aestivum
Traes_6DL_8ECBBC867
I
0.000
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
0.000
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
0.000
VIT_17s0000g06250
Vitis vinifera
VIT_17s0000g06250
I
0.000
Ca_13151
Cicer arietinum
Ca_13151
I
0.000
Cla019404
Citrullus lanatus
Cla019404
I
0.000
Pm024905
Prunus mume
Pm024905
I
0.000
30138.m004071
Ricinus communis
30138.m004071
I
0.000
cassava35166.m1
Manihot esculenta
cassava35166.m1
I
0.000
mg020279m
Mimulus guttatus
mg020279m
I
0.000
mgf022310m
Mimulus guttatus
mgf022310m
I
0.000
Bostr.3288s0094
Boechera stricta
Bostr.3288s0094
I
0.000
Cagra.0402s0077
Capsella grandiflora
Cagra.0402s0077
I
0.000
Cagra.4153s0001
Capsella grandiflora
Cagra.4153s0001
I
0.000
Carubv10011133m.g
Capsella rubella
Carubv10011133m.g
I
0.000
Carubv10021541m.g
Capsella rubella
Carubv10021541m.g
I
0.000
evm.TU.supercontig_423.7
Carica papaya
evm.TU.supercontig_423.7
I
0.000
gene26015-v1.0-hybrid
Fragaria vesca
gene26015-v1.0-hybrid
I
0.000
Gorai.006G266900
Gossypium raimondii
Gorai.006G266900
I
0.000
Gorai.008G193400
Gossypium raimondii
Gorai.008G193400
I
0.000
Lus10034456.g
Linum usitatissimum
Lus10034456.g
I
0.000
Lus10035008.g
Linum usitatissimum
Lus10035008.g
I
0.000
MDP0000261199
Malus domestica
MDP0000261199
I
0.000
MDP0000266172
Malus domestica
MDP0000266172
I
0.000
orange1.1g036926m.g
Citrus sinensis
orange1.1g036926m.g
I
0.000
Pavir.Aa00708
Panicum virgatum
Pavir.Aa00708
I
0.000
Pavir.Ab02992
Panicum virgatum
Pavir.Ab02992
I
0.000
Pavir.Da01160
Panicum virgatum
Pavir.Da01160
I
0.000
Pavir.J13146
Panicum virgatum
Pavir.J13146
I
0.000
Thhalv10019554m.g
Eutrema salsugineum
Thhalv10019554m.g
I
0.000
chr4.CM0087.990.nc
Lotus japonicus
chr4.CM0087.990.nc
I
0.000
PDK_20s1383532g001
Phoenix dactylifera
PDK_20s1383532g001
I
0.000
AMTR_s00021p00218190
Amborella trichopoda
AMTR_s00021p00218190
N
0.000
RKD3
Arabidopsis thaliana
AT5G66990
N
0.000
BGIOSGA001434
Oryza indica
BGIOSGA001434
N
0.000
BRADI1G45170
Brachypodium distachyon
BRADI1G45170
N
0.000
BRADI2G40920
Brachypodium distachyon
BRADI2G40920
N
0.000
BRADI3G59410
Brachypodium distachyon
BRADI3G59410
N
0.000
F775_03178
Aegilops tauschii
F775_03178
N
0.000
GRMZM2G071322
Zea mays
GRMZM2G071322
N
0.000
GSMUA_Achr4G08610_001
Musa acuminata
GSMUA_Achr4G08610_001
N
0.000
GSMUA_AchrUn_randomG11290_001
Musa acuminata
GSMUA_AchrUn_randomG11290_001
N
0.000
LPERR01G16660
Leersia perrieri
LPERR01G16660
N
0.000
LPERR02G26470
Leersia perrieri
LPERR02G26470
N
0.000
OBART01G19230
Oryza barthii
OBART01G19230
N
0.000
OGLUM01G22860
Oryza glumaepatula
OGLUM01G22860
N
0.000
ONIVA01G21910
Oryza nivara
ONIVA01G21910
N
0.000
OPUNC01G19590
Oryza punctata
OPUNC01G19590
N
0.000
ORUFI01G21630
Oryza rufipogon
ORUFI01G21630
N
0.000
Sb03g025130
Sorghum bicolor
Sb03g025130
N
0.000
Sb04g028040
Sorghum bicolor
Sb04g028040
N
0.000
Si005102m.g
Setaria italica
Si005102m.g
N
0.000
Si019159m.g
Setaria italica
Si019159m.g
N
0.000
fgenesh1_pg.scaffold_823000001
Physcomitrella patens
fgenesh1_pg.scaffold_823000001
N
0.000
Bostr.0568s0123
Boechera stricta
Bostr.0568s0123
N
0.000
Cagra.2007s0003
Capsella grandiflora
Cagra.2007s0003
N
0.000
Carubv10027579m.g
Capsella rubella
Carubv10027579m.g
N
0.000
Pavir.Ea01492
Panicum virgatum
Pavir.Ea01492
N
0.000
Pavir.Eb01347
Panicum virgatum
Pavir.Eb01347
N
0.000
Pavir.J14787
Panicum virgatum
Pavir.J14787
N
0.000
Thhalv10005560m.g
Eutrema salsugineum
Thhalv10005560m.g
N
0.000
PDK_20s1788591g001
Phoenix dactylifera
PDK_20s1788591g001
N
0.000