CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_05925
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_05925
T077286_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05540
M01179_2.00
Histoplasma capsulatum
NNYGCCTDAN
NTHAGGCRNN
PBM
Lambert et al.(2019)
pTH11155
0.790
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_05925T0
C2H2 ZF
88
115
IYCDHPECRENAPVFRRPCEWNKHMDKH
CIMG_05925T0
C2H2 ZF
119
146
YKCSNPDCAKLPGFTYSGGLLRHQREVH
CIMG_05925T0
C2H2 ZF
155
184
LMCPFADCNRSSGKGFTRQENLNEHLRRLH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK25011.1
Cannabis sativa
PK25011.1
D
0.000
Cla008712
Citrullus lanatus
Cla008712
I
0.000
Thhalv10028592m.g
Eutrema salsugineum
Thhalv10028592m.g
I
0.000
SapurV1A.0106s0340
Salix purpurea
SapurV1A.0106s0340
I
0.000
SapurV1A.0042s0570
Salix purpurea
SapurV1A.0042s0570
I
0.000
MDP0000207866
Malus domestica
MDP0000207866
I
0.000
Gorai.013G254100
Gossypium raimondii
Gorai.013G254100
I
0.000
Aquca_014_00610
Aquilegia coerulea
Aquca_014_00610
I
0.000
mgf007720m
Mimulus guttatus
mgf007720m
I
0.000
Cucsa.087050
Cucumis sativus
Cucsa.087050
I
0.000
GLYMA02G44910
Glycine max
GLYMA02G44910
I
0.000
TCM_040945
Theobroma cacao
TCM_040945
I
0.000
Solyc12g099760.1
Solanum lycopersicum
Solyc12g099760.1
I
0.000
Solyc11g065110.1
Solanum lycopersicum
Solyc11g065110.1
I
0.000
PRUPE_ppa005223mg
Prunus persica
PRUPE_ppa005223mg
I
0.000
POPTR_0009s07600
Populus trichocarpa
POPTR_0009s07600
I
0.000
POPTR_0001s28350
Populus trichocarpa
POPTR_0001s28350
I
0.000
PGSC0003DMG400004714
Solanum tuberosum
PGSC0003DMG400004714
I
0.000
MTR_3g045830
Medicago truncatula
MTR_3g045830
I
0.000
GLYMA14G03850
Glycine max
GLYMA14G03850
I
0.000
GLYMA04G15260
Glycine max
GLYMA04G15260
I
0.000
29811.m000540
Ricinus communis
29811.m000540
N
0.000