CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAEL000869
(
Aedes aegypti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AAEL000869
T078771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sens
M03666_2.00
Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA
SELEX
Nitta et al.(2015)
sens_1
0.805
0.913
sens
M06056_2.00
Drosophila melanogaster
AAATCACDGC
GCHGTGATTT
B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573
0.805
0.913
sens
M06057_2.00
Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN
B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573
0.805
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL000869-PA
C2H2 ZF
329
351
YQCKQCGKTFKRSSTLSTHLLIH
AAEL000869-PA
C2H2 ZF
357
379
YPCQYCGKRFHQKSDMKKHTYIH
AAEL000869-PA
C2H2 ZF
385
407
HKCVVCLKAFSQSSNLITHMRKH
AAEL000869-PA
C2H2 ZF
413
436
FSCGLCDKAFQRKVDLRRHREGQH
Links
Other
C2H2 ZF
family TFs
Other
Aedes aegypti
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
SCR2
Oryza sativa
OS12G0122000
N
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
Traes_5DL_3EC609F62
Triticum aestivum
Traes_5DL_3EC609F62
N
Ca_09530
Cicer arietinum
Ca_09530
N
Cla012346
Citrullus lanatus
Cla012346
N
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
mgf012242m
Mimulus guttatus
mgf012242m
N
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
LPERR11G01210
Leersia perrieri
LPERR11G01210
N
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
Bo8g083500
Brassica oleracea
Bo8g083500
N
BRADI4G44090
Brachypodium distachyon
BRADI4G44090
N
F775_14336
Aegilops tauschii
F775_14336
N
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
GLYMA18G45220
Glycine max
GLYMA18G45220
N
GRMZM2G131516
Zea mays
GRMZM2G131516
N
GSMUA_Achr8G09400_001
Musa acuminata
GSMUA_Achr8G09400_001
N
SCR
Arabidopsis thaliana
AT3G54220
N
MLOC_64716
Hordeum vulgare
MLOC_64716
N
MLOC_79758
Hordeum vulgare
MLOC_79758
N
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
OGLUM12G01020
Oryza glumaepatula
OGLUM12G01020
N
ONIVA11G01600
Oryza nivara
ONIVA11G01600
N
OPUNC11G01240
Oryza punctata
OPUNC11G01240
N
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N