Zfp408 (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000000387 T092650_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000000364 C2H2 ZF 321 343
ENSDORP00000000364 C2H2 ZF 349 371
ENSDORP00000000364 C2H2 ZF 377 399
ENSDORP00000000364 C2H2 ZF 405 427
ENSDORP00000000364 C2H2 ZF 436 458
ENSDORP00000000364 C2H2 ZF 464 486
ENSDORP00000000364 C2H2 ZF 492 514
ENSDORP00000000364 C2H2 ZF 519 541
ENSDORP00000000364 C2H2 ZF 547 569
ENSDORP00000000364 C2H2 ZF 575 597

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.000
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.000
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.000
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I 0.000
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.000
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.000
TCM_022113 Theobroma cacao TCM_022113 I 0.000
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.000
Ca_12027 Cicer arietinum Ca_12027 I 0.000
Ca_12028 Cicer arietinum Ca_12028 I 0.000
Cla018106 Citrullus lanatus Cla018106 I 0.000
Cla018556 Citrullus lanatus Cla018556 I 0.000
29805.m001471 Ricinus communis 29805.m001471 I 0.000
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.000
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.000
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.000
mgf000337m Mimulus guttatus mgf000337m I 0.000
mgf004062m Mimulus guttatus mgf004062m I 0.000
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.000
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.000
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.000
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.000
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.000
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.000
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.000
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.000
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.000
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.000
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.000
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.000
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.000
OB04G18770 Oryza brachyantha OB04G18770 I 0.000
OB04G18780 Oryza brachyantha OB04G18780 I 0.000
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.000
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.000
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.000
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.000
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.000
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.000
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.000
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.000
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.000
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.000
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.000
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.000
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.000
MDP0000559232 Malus domestica MDP0000559232 N 0.000
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.000
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.000
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.000
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.000
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.000
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.000
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.000
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.000
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.000
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.000
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.000
S1FA2 Oryza sativa OS04G0408700 N 0.000
OS04G0408900 Oryza sativa OS04G0408900 N 0.000
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.000
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.000
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.000
OBART04G11650 Oryza barthii OBART04G11650 N 0.000
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.000
Si011030m.g Setaria italica Si011030m.g N 0.000
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.000
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.000
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.000
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.000
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.000
OBART04G11660 Oryza barthii OBART04G11660 N 0.000