GRMZM2G455889 (Zea mays)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GRMZM2G455889 T118628_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.762 0.696
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.762 0.696
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.755 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G455889_P01 C2H2 ZF 378 400
GRMZM2G455889_P01 C2H2 ZF 424 446

Links

Other C2H2 ZF family TFs
Other Zea mays TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 0.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 0.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.000
OGLUM10G00640 Oryza glumaepatula OGLUM10G00640 N 0.000
Si036337m.g Setaria italica Si036337m.g N 0.000
OS10G0115500 Oryza sativa OS10G0115500 N 0.000
OS10G0115200 Oryza sativa OS10G0115200 N 0.000
OS10G0114500 Oryza sativa OS10G0114500 N 0.000
OS03G0237401 Oryza sativa OS03G0237401 N 0.000
ORUFI10G00650 Oryza rufipogon ORUFI10G00650 N 0.000
OPUNC10G00600 Oryza punctata OPUNC10G00600 N 0.000
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.000
ONIVA10G01090 Oryza nivara ONIVA10G01090 N 0.000
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.000
OMERI10G00690 Oryza meridionalis OMERI10G00690 N 0.000
OLONG_022525 Oryza longistaminata OLONG_022525 N 0.000
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.000
OGLUM10G00630 Oryza glumaepatula OGLUM10G00630 N 0.000
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.000
OBART10G00650 Oryza barthii OBART10G00650 N 0.000
OBART10G00640 Oryza barthii OBART10G00640 N 0.000
OB10G10650 Oryza brachyantha OB10G10650 N 0.000
OB10G10530 Oryza brachyantha OB10G10530 N 0.000
LPERR10G00510 Leersia perrieri LPERR10G00510 N 0.000
LPERR10G00500 Leersia perrieri LPERR10G00500 N 0.000
GRMZM2G166230 Zea mays GRMZM2G166230 N 0.000
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.000
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.000
BGIOSGA032380 Oryza indica BGIOSGA032380 N 0.000