PGSC0003DMG400030803 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400030803 T125846_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400079144 C2H2 ZF 407 428
PGSC0003DMT400079144 C2H2 ZF 427 453

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000452 Oryza indica BGIOSGA000452 N
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.764
Bo5g081360 Brassica oleracea Bo5g081360 N 0.782
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N 0.772
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.764
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.758
F775_11193 Aegilops tauschii F775_11193 N
F775_14972 Aegilops tauschii F775_14972 N 0.758
GLYMA01G22120 Glycine max GLYMA01G22120 N
GLYMA02G10970 Glycine max GLYMA02G10970 N
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.774
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.774
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.774
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.774
GRMZM2G000836 Zea mays GRMZM2G000836 N 0.772
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.764
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.758
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.764
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.774
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N
LPERR01G32600 Leersia perrieri LPERR01G32600 N
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.764
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.764
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.758
OB05G26090 Oryza brachyantha OB05G26090 N 0.772
OB08G26650 Oryza brachyantha OB08G26650 N 0.764
OBART01G37960 Oryza barthii OBART01G37960 N
OBART02G07320 Oryza barthii OBART02G07320 N
OBART08G19670 Oryza barthii OBART08G19670 N 0.764
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N 0.772
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.764
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.764
OMERI01G34920 Oryza meridionalis OMERI01G34920 N
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.764
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.764
ONIVA04G25710 Oryza nivara ONIVA04G25710 N
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.764
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.764
OPUNC01G36780 Oryza punctata OPUNC01G36780 N
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.764
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.764
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.764
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.764
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.764
OS01G0859100 Oryza sativa OS01G0859100 N
OS08G0504000 Oryza sativa OS08G0504000 N 0.764
OS09G0485600 Oryza sativa OS09G0485600 N 0.764
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.774
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.774
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.774
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.774
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.774
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.758
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.764
Sb09g021850 Sorghum bicolor Sb09g021850 N
Si013819m.g Setaria italica Si013819m.g N 0.764
Si029897m.g Setaria italica Si029897m.g N 0.758
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.774
TCM_011858 Theobroma cacao TCM_011858 N
TCM_041441 Theobroma cacao TCM_041441 N 0.774
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.758
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.758
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.758
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.758
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.774
Ca_07051 Cicer arietinum Ca_07051 N 0.774
Ca_16482 Cicer arietinum Ca_16482 N 0.769
Ca_24699 Cicer arietinum Ca_24699 N
Cla000184 Citrullus lanatus Cla000184 N 0.787
Pm001374 Prunus mume Pm001374 N 0.774
Pm029018 Prunus mume Pm029018 N
30055.m001542 Ricinus communis 30055.m001542 N 0.774
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.774
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.774
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.787
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.774
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.774
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.774
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.774
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.774
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.764
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.774
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.774
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.774
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.774
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.774
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.774
Lus10021700.g Linum usitatissimum Lus10021700.g N
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.774
Lus10035044.g Linum usitatissimum Lus10035044.g N
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.774
MDP0000131949 Malus domestica MDP0000131949 N 0.774
MDP0000300013 Malus domestica MDP0000300013 N 0.774
MDP0000303483 Malus domestica MDP0000303483 N
MDP0000899280 Malus domestica MDP0000899280 N
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.774
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.758
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.764
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.764
Pavir.J11927 Panicum virgatum Pavir.J11927 N
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.774
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.774
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N
PK05257.1 Cannabis sativa PK05257.1 N 0.768
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.768