PMAA_059470 (Penicillium marneffei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PMAA_059470 T146607_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_01877
M01175_2.00 		Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN		 PBM
Lambert et al.(2019)
pTH10260 		0.811 0.917
NCU03699
M01878_2.00 		Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN		 PBM
Weirauch et al.(2014)
pTH8956 		0.810 0.917
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_059470.t1 C2H2 ZF 274 294
PMAA_059470.t1 C2H2 ZF 301 327
PMAA_059470.t1 C2H2 ZF 332 362
PMAA_059470.t1 C2H2 ZF 397 416

Links

Other C2H2 ZF family TFs
Other Penicillium marneffei TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.076000 Cucumis sativus Cucsa.076000 N
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N
PK13777.1 Cannabis sativa PK13777.1 N
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N
mgf016294m Mimulus guttatus mgf016294m N
GLYMA05G30150 Glycine max GLYMA05G30150 N
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N
30093.m000368 Ricinus communis 30093.m000368 N
Pm003925 Prunus mume Pm003925 N
Ca_00041 Cicer arietinum Ca_00041 N
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N
TCM_006252 Theobroma cacao TCM_006252 N
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N
GLYMA08G13310 Glycine max GLYMA08G13310 N