Cucsa.076000 (Cucumis sativus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cucsa.076000 T137906_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.076000.1 C2H2 ZF 65 89
Cucsa.076000.1 C2H2 ZF 94 118
Cucsa.076000.1 C2H2 ZF 124 148
Cucsa.076000.1 C2H2 ZF 154 179
Cucsa.076000.1 C2H2 ZF 217 242

Links

Other C2H2 ZF family TFs
Other Cucumis sativus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.815
Ca_00041 Cicer arietinum Ca_00041 N 0.814
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.810
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.808
30093.m000368 Ricinus communis 30093.m000368 N 0.808
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.808
PK13777.1 Cannabis sativa PK13777.1 N 0.808
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.806
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.806
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.806
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.806
Pm003925 Prunus mume Pm003925 N 0.806
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.806
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.804
TCM_006252 Theobroma cacao TCM_006252 N 0.799
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.796
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.796
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.796
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.796
mgf016294m Mimulus guttatus mgf016294m N 0.776