CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016294m
(
Mimulus guttatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
mgf016294m
T140298_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016294m
C2H2 ZF
77
101
FLCSYEGCGKTFIDAGALRKHSHIH
mgf016294m
C2H2 ZF
106
130
YICHYENCGKKFLDSSKLKRHFLIH
mgf016294m
C2H2 ZF
136
160
FVCPHEGCGKAFSLDFNLRSHMKTH
mgf016294m
C2H2 ZF
166
191
HVCPYSECGKRYAHEYKLKNHISSHH
mgf016294m
C2H2 ZF
231
256
YGCPYEGCEKAYIHEYKLNLHLRREH
Links
Other
C2H2 ZF
family TFs
Other
Mimulus guttatus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjT40J14.40.nc
Lotus japonicus
LjT40J14.40.nc
N
0.787
POPTR_0022s00900
Populus trichocarpa
POPTR_0022s00900
N
0.784
SapurV1A.0136s0510
Salix purpurea
SapurV1A.0136s0510
N
0.784
VIT_12s0035g00660
Vitis vinifera
VIT_12s0035g00660
N
0.782
30093.m000368
Ricinus communis
30093.m000368
N
0.780
Eucgr.G00356
Eucalyptus grandis
Eucgr.G00356
N
0.779
GLYMA05G30150
Glycine max
GLYMA05G30150
N
0.778
GLYMA08G13310
Glycine max
GLYMA08G13310
N
0.778
Ca_00041
Cicer arietinum
Ca_00041
N
0.778
evm.TU.supercontig_161.1
Carica papaya
evm.TU.supercontig_161.1
N
0.778
Cucsa.076000
Cucumis sativus
Cucsa.076000
N
0.776
POPTR_0004s23050
Populus trichocarpa
POPTR_0004s23050
N
0.775
SapurV1A.0470s0060
Salix purpurea
SapurV1A.0470s0060
N
0.775
SapurV1A.0618s0010
Salix purpurea
SapurV1A.0618s0010
N
0.775
PK13777.1
Cannabis sativa
PK13777.1
N
0.775
PRUPE_ppa007287mg
Prunus persica
PRUPE_ppa007287mg
N
0.774
Pm003925
Prunus mume
Pm003925
N
0.774
TCM_006252
Theobroma cacao
TCM_006252
N
0.772
Gorai.002G214700
Gossypium raimondii
Gorai.002G214700
N
0.772
cassava13878.valid.m1
Manihot esculenta
cassava13878.valid.m1
N
0.765