CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa007287mg
(
Prunus persica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PRUPE_ppa007287mg
T127149_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ24499
C2H2 ZF
77
101
FLCSYEGCGKTFIDAGALRKHSHIH
EMJ24499
C2H2 ZF
106
130
YVCHYEGCGKKFLDSSKLKRHFLIH
EMJ24499
C2H2 ZF
136
160
YRCNFEGCGKAFSLDFNLRSHMKTH
EMJ24499
C2H2 ZF
166
191
HICPYPDCGKRYAHEYKLKNHISSHH
EMJ24499
C2H2 ZF
230
255
YACPYEGCEKAYIHEYKLKLHLRREH
Links
Other
C2H2 ZF
family TFs
Other
Prunus persica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm003925
Prunus mume
Pm003925
N
0.825
Gorai.002G214700
Gossypium raimondii
Gorai.002G214700
N
0.812
Eucgr.G00356
Eucalyptus grandis
Eucgr.G00356
N
0.809
Ca_00041
Cicer arietinum
Ca_00041
N
0.808
evm.TU.supercontig_161.1
Carica papaya
evm.TU.supercontig_161.1
N
0.808
Cucsa.076000
Cucumis sativus
Cucsa.076000
N
0.806
30093.m000368
Ricinus communis
30093.m000368
N
0.805
PK13777.1
Cannabis sativa
PK13777.1
N
0.805
TCM_006252
Theobroma cacao
TCM_006252
N
0.802
VIT_12s0035g00660
Vitis vinifera
VIT_12s0035g00660
N
0.802
GLYMA05G30150
Glycine max
GLYMA05G30150
N
0.800
GLYMA08G13310
Glycine max
GLYMA08G13310
N
0.800
POPTR_0004s23050
Populus trichocarpa
POPTR_0004s23050
N
0.800
POPTR_0022s00900
Populus trichocarpa
POPTR_0022s00900
N
0.800
SapurV1A.0136s0510
Salix purpurea
SapurV1A.0136s0510
N
0.800
SapurV1A.0470s0060
Salix purpurea
SapurV1A.0470s0060
N
0.800
SapurV1A.0618s0010
Salix purpurea
SapurV1A.0618s0010
N
0.800
LjT40J14.40.nc
Lotus japonicus
LjT40J14.40.nc
N
0.798
cassava13878.valid.m1
Manihot esculenta
cassava13878.valid.m1
N
0.790
mgf016294m
Mimulus guttatus
mgf016294m
N
0.774