CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXP1
(
Microcebus murinus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSMICG00000005350
T186179_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.827
1.000
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.827
1.000
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.827
1.000
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.827
1.000
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.827
1.000
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.827
1.000
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.827
1.000
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.827
1.000
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.827
1.000
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.827
1.000
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.751
0.901
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.751
0.901
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.751
0.901
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.751
0.901
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.751
0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.745
0.765
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.745
0.765
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.745
0.765
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.745
0.765
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.679
0.469
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.679
0.469
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.679
0.469
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.679
0.469
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.679
0.469
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.679
0.469
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.679
0.469
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.678
0.469
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.678
0.469
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.678
0.469
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.678
0.469
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.678
0.469
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.678
0.469
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.678
0.469
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.678
0.469
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.665
0.457
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.665
0.432
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.665
0.432
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.665
0.432
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.665
0.432
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.665
0.432
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.665
0.432
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.665
0.432
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.665
0.432
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.665
0.432
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.665
0.444
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000004883
Forkhead
465
548
RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQK
Links
Other
Forkhead
family TFs
Other
Microcebus murinus
TFs
663 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PBX1
Homo sapiens
ENSG00000185630
D
Pbx1
Mus musculus
ENSMUSG00000052534
D
ANCDUO_01775
Ancylostoma duodenale
ANCDUO_01775
I
Ogr15448
Ophisaurus gracilis
Ogr15448
I
fgenesh1_pg.C_scaffold_1001003
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1001003
I
LDEC006593
Leptinotarsa decemlineata
LDEC006593
I
AEPI008243
Anopheles epiroticus
AEPI008243
I
MDOA002143
Musca domestica
MDOA002143
I
PPAI000859
Phlebotomus papatasi
PPAI000859
I
A_00975
Schistosoma haematobium
A_00975
I
ACOC_0000393801
Angiostrongylus costaricensis
ACOC_0000393801
I
ANCCEY_11361
Ancylostoma ceylanicum
ANCCEY_11361
I
Myotis_brandtii_MIMI_L668_10004071
Myotis brandtii
Myotis_brandtii_MIMI_L668_10004071
I
D915_05491
Fasciola hepatica
D915_05491
I
HmN_000400100
Hymenolepis microstoma
HmN_000400100
I
MhA1_Contig138.frz3.gene24
Meloidogyne hapla
MhA1_Contig138.frz3.gene24
I
PXEA_0001880101
Protopolystoma xenopodis
PXEA_0001880101
I
SVUK_0000462001
Strongylus vulgaris
SVUK_0000462001
I
SVUK_0001050601
Strongylus vulgaris
SVUK_0001050601
I
TELCIR_02026
Teladorsagia circumcincta
TELCIR_02026
I
PBX1
Oryzias latipes
ENSORLG00000016702
I
CABZ01017151.1
Danio rerio
ENSDARG00000104156
I
PBX1
Echinops telfairi
ENSETEG00000019309
I
ENSGMOG00000006428
Gadus morhua
ENSGMOG00000006428
I
ENSLACG00000016442
Latimeria chalumnae
ENSLACG00000016442
I
ENSLOCG00000006841
Lepisosteus oculatus
ENSLOCG00000006841
I
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
PBX4
Oryctolagus cuniculus
ENSOCUG00000029208
I
Myotis_brandtii_MIMI_R196_10004074
Myotis brandtii
Myotis_brandtii_MIMI_R196_10004074
I
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
PBX3
Tupaia belangeri
ENSTBEG00000016855
I
MESCA000707
Megaselia scalaris
MESCA000707
I
MYCFIDRAFT_76128
Pseudocercospora fijiensis
MYCFIDRAFT_76128
I
UCRNP2_7717
Neofusicoccum parvum
UCRNP2_7717
I
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
CBG26065
Caenorhabditis briggsae
CBG26065
I
ORUFI07G17770
Oryza rufipogon
ORUFI07G17770
N