CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
V499_02833
(
Pseudogymnoascus pannorum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
V499_02833
T195617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY77878
GATA
407
442
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRR
Links
Other
GATA
family TFs
Other
Pseudogymnoascus pannorum
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
S40285_05706
Stachybotrys chlorohalonata
S40285_05706
N
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
GPLIN_000170600
Globodera pallida
GPLIN_000170600
N
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
SAKL0H00726g
Lachancea kluyveri
SAKL0H00726g
N
Kwal_9519
Kluyveromyces waltii
Kwal_9519
N
fgenesh2_pg.9_#_353
Fragilariopsis cylindrus
fgenesh2_pg.9_#_353
N
fgenesh2_pg.4_#_1036
Fragilariopsis cylindrus
fgenesh2_pg.4_#_1036
N
UCREL1_5722
Eutypa lata
UCREL1_5722
N
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
Thaps5285
Thalassiosira pseudonana
Thaps5285
N
Thaps22889
Thalassiosira pseudonana
Thaps22889
N
Thaps12024
Thalassiosira pseudonana
Thaps12024
N
Thaps11168
Thalassiosira pseudonana
Thaps11168
N
TGME49_081900
Toxoplasma gondii
TGME49_081900
N
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
Phatr3_J50240
Phaeodactylum tricornutum
Phatr3_J50240
N
Phatr3_J47350
Phaeodactylum tricornutum
Phatr3_J47350
N
Phatr3_J38097
Phaeodactylum tricornutum
Phatr3_J38097
N
Phatr3_J33840
Phaeodactylum tricornutum
Phatr3_J33840
N
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
MYCTH_2294733
Myceliophthora thermophila
MYCTH_2294733
N
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
LALA0_S10e00254g
Lachancea lanzarotensis
LALA0_S10e00254g
N
KUCA_T00004799001
Kuraishia capsulata
KUCA_T00004799001
N
K437DRAFT_66818
Tilletiaria anomala
K437DRAFT_66818
N
K437DRAFT_266676
Tilletiaria anomala
K437DRAFT_266676
N
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
AWRI1499_2837
Brettanomyces bruxellensis
AWRI1499_2837
N