ENSAMXG00000000221 (Astyanax mexicanus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSAMXG00000000221 T198898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.764 0.764
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.760 0.760
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.760 0.760
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000000235 Grainyhead 202 426

Links

Other Grainyhead family TFs
Other Astyanax mexicanus TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 0.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 0.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.000
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.000
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.000
PK28293.1 Cannabis sativa PK28293.1 N 0.000
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.000
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.000
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.000
MDP0000826219 Malus domestica MDP0000826219 N 0.000
MDP0000320521 Malus domestica MDP0000320521 N 0.000
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.000
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.000
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.000
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.000
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.000
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.000
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.000
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N 0.000
29780.m001393 Ricinus communis 29780.m001393 N 0.000
Pm005924 Prunus mume Pm005924 N 0.000
Cla005911 Citrullus lanatus Cla005911 N 0.000
TCM_011212 Theobroma cacao TCM_011212 N 0.000
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.000
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.000
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.000
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.000
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.000