CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA18G09030
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA18G09030
T200248_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA18G09030.1
GRAS
175
545
LKEMLYTCAEAMARNDMETTDWLVSELRKMVSISGNPIQRLGAYILESFVARMAASGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEALKEESEVHIVDFQIGQGTQWVSLIQALAHRPGGPPKIRISGVDDSYSAYARGGGLDIVGKRLSAHAQSCHVPFEFNAVRVPASQVQLEDLELLPYEAVAVNFAISLHHVPDESVNSHNHRDRLLRLAKRLSPKVVTLVEQEFNTNNAPFLQRFDETMKYYLAVFESIDTVLPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWKMRFTKAGFTPYPLSSVINSSIKDLLQSYHGHYTLEERDGALFLGWMNQVLIASCAWS
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_13855
Cicer arietinum
Ca_13855
N
0.846
LjSGA_018703.2
Lotus japonicus
LjSGA_018703.2
N
0.811
chr6.LjT11E14.20.nc
Lotus japonicus
chr6.LjT11E14.20.nc
N
0.854
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
0.710
MDP0000284679
Malus domestica
MDP0000284679
N
0.721
MDP0000205236
Malus domestica
MDP0000205236
N
0.721
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.702
Lus10003772.g
Linum usitatissimum
Lus10003772.g
N
0.704
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.713
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.726
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.721
27613.m000642
Ricinus communis
27613.m000642
N
0.718
Pm012019
Prunus mume
Pm012019
N
0.726
Bo9g009240
Brassica oleracea
Bo9g009240
N
0.710
Ca_09696
Cicer arietinum
Ca_09696
N
0.739
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.715
TCM_030733
Theobroma cacao
TCM_030733
N
0.707
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.702
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.707
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
0.740
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
0.835
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.775
GLYMA09G22110
Glycine max
GLYMA09G22110
N
0.757
GLYMA08G43780
Glycine max
GLYMA08G43780
N
0.940
GLYMA02G46730
Glycine max
GLYMA02G46730
N
0.780